Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g01857 | ATGACGCGCGCACTCAGAATTCTCAAATCTGCGGATAACGCCGCGGTGGCAGCGGCGGCTCCGCCGCCGGAGCCCGTGGCGCTCGAGTCCGATTTCGTGGTGATTCTGGCAGCTCTCCTGTGCGCTTTAATCTGCGTGGTGGGACTTGTTGCGGTGGCGCGGTGCGCGTGGCTCCGGCGAGGTCCCGGCGGCGGAAACTCGCCGCGGCAGGCGGTGGTGAACAAGGGACTGAAGAAGAAGGTGCTTCAGTCGCTGCCGAAGTTCGCGTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGTGATTTGCCTGGGTGATTTCGCCGCCGGCGACGAGATTCGCGTGCTGCCGCAGTGCGGCCACGGCTTCCACGTGTCCTGCATCGACGAGTGGCTGAGGTCCCACTCCTCCTGCCCTTCCTGCCGCCAGGTCCTCGCTGTCGCCAGGTGTCAGAAGTGCGGGCGCTTTCCGGCCACGGCTGCCGGAGCCTCGAGAAGCGGCGCCAGTGAACTGGAATTGAAGTCCAGAGAAGACAACAATGCTGCTTCAATCGGAAATTGCAGTAATAACAACGGTGATGGCGGTGGAAGTGGTAATAACGTGAATCATCATCATAGCCACCACTTGAACAGTGGGTTCTTGCCATGA | 660 | 0.6152 | MTRALRILKSADNAAVAAAAPPPEPVALESDFVVILAALLCALICVVGLVAVARCAWLRRGPGGGNSPRQAVVNKGLKKKVLQSLPKFAYVDSNPSKWVATSECVICLGDFAAGDEIRVLPQCGHGFHVSCIDEWLRSHSSCPSCRQVLAVARCQKCGRFPATAAGASRSGASELELKSREDNNAASIGNCSNNNGDGGGSGNNVNHHHSHHLNSGFLP* | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g01857 | 219 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 23 | 158 | - | - | |
Phac2g01857 | 219 | MobiDBLite | consensus disorder prediction | 197 | 219 | - | - | |
Phac2g01857 | 219 | ProSiteProfiles | Zinc finger RING-type profile. | 104 | 146 | IPR001841 | - | |
Phac2g01857 | 219 | Pfam | Ring finger domain | 103 | 146 | IPR001841 | - | |
Phac2g01857 | 219 | SUPERFAMILY | RING/U-box | 83 | 151 | - | - | |
Phac2g01857 | 219 | CDD | RING-H2_EL5-like | 103 | 146 | - | - | |
Phac2g01857 | 219 | SMART | FANCL_C_2 | 100 | 154 | - | - | |
Phac2g01857 | 219 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 151 | IPR013083 | - | |
Phac2g01857 | 219 | MobiDBLite | consensus disorder prediction | 197 | 211 | - | - | |
Phac2g01857 | 219 | SMART | ring_2 | 104 | 145 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g01857 | Phac-Chr2 | 20740840 | 20743303 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g01857 | 1 | 182 | C3H Transcription Factor Family | AT1G76410 | 55.026 | 6.17e-60 | 184 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g01857 | - | - | vun:114170353 | 339.732 |