Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01857 ATGACGCGCGCACTCAGAATTCTCAAATCTGCGGATAACGCCGCGGTGGCAGCGGCGGCTCCGCCGCCGGAGCCCGTGGCGCTCGAGTCCGATTTCGTGGTGATTCTGGCAGCTCTCCTGTGCGCTTTAATCTGCGTGGTGGGACTTGTTGCGGTGGCGCGGTGCGCGTGGCTCCGGCGAGGTCCCGGCGGCGGAAACTCGCCGCGGCAGGCGGTGGTGAACAAGGGACTGAAGAAGAAGGTGCTTCAGTCGCTGCCGAAGTTCGCGTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGTGATTTGCCTGGGTGATTTCGCCGCCGGCGACGAGATTCGCGTGCTGCCGCAGTGCGGCCACGGCTTCCACGTGTCCTGCATCGACGAGTGGCTGAGGTCCCACTCCTCCTGCCCTTCCTGCCGCCAGGTCCTCGCTGTCGCCAGGTGTCAGAAGTGCGGGCGCTTTCCGGCCACGGCTGCCGGAGCCTCGAGAAGCGGCGCCAGTGAACTGGAATTGAAGTCCAGAGAAGACAACAATGCTGCTTCAATCGGAAATTGCAGTAATAACAACGGTGATGGCGGTGGAAGTGGTAATAACGTGAATCATCATCATAGCCACCACTTGAACAGTGGGTTCTTGCCATGA 660 0.6152 MTRALRILKSADNAAVAAAAPPPEPVALESDFVVILAALLCALICVVGLVAVARCAWLRRGPGGGNSPRQAVVNKGLKKKVLQSLPKFAYVDSNPSKWVATSECVICLGDFAAGDEIRVLPQCGHGFHVSCIDEWLRSHSSCPSCRQVLAVARCQKCGRFPATAAGASRSGASELELKSREDNNAASIGNCSNNNGDGGGSGNNVNHHHSHHLNSGFLP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01857 219 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 23 158 - -
Phac2g01857 219 MobiDBLite consensus disorder prediction 197 219 - -
Phac2g01857 219 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Phac2g01857 219 Pfam Ring finger domain 103 146 IPR001841 -
Phac2g01857 219 SUPERFAMILY RING/U-box 83 151 - -
Phac2g01857 219 CDD RING-H2_EL5-like 103 146 - -
Phac2g01857 219 SMART FANCL_C_2 100 154 - -
Phac2g01857 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 151 IPR013083 -
Phac2g01857 219 MobiDBLite consensus disorder prediction 197 211 - -
Phac2g01857 219 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01857 Phac-Chr2 20740840 20743303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01857 1 182 C3H Transcription Factor Family AT1G76410 55.026 6.17e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01857 - - vun:114170353 339.732