Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01849 ATGATTAAAGTTTGGCCCTTGGTTTTCCTGGTTCTCTCCATTGGATGCTTTTCAAATGGGCGTGGCGGGCAAAATTCCACAGTACCAGATTTTGTAAATATTGGGGCTCTCTTTTCCTTCAATACCAGTGTTGGTAGAACTATAAAAGTTGCATTAGAAGCTGCGTTTGAAGATATAAATTCTGATCCAACTATTCTTGGTAGAACCAAGCTAAACCTCTCACTGCAAGAAGATTCTAAGTACAGAGGTTTCCTGAGCATTGCCGAGGTTTTGCAGGTCATGGCAAGACAGACGGTGGCGATAATAGGCCCCCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTCCAAGTTCCTCTTTTGTCATTTTCAGCTTTCGACCCTACTCTTTCTTCACTTCAATTCCCATTCTTCATTAGAACTTGCCATAGTGATCTTTTTCAAATGACTGCTATAGCAGACCTTATTGACTACTATGGCTGGAAAGATGTTATCGCTGTCTACCTTGACGATGATAATGGAAGAAATGGAATTGGCGCATTAGGTGATAAGCTTGCGGAGAGGCGTTGCAAGATATCATATAAAGCAGCTTTGAGTCCCCAAGCATCTATGGAAGAGATTACTAATGTGCTTGTGCAGGTGGCTCTGGCAGAATCACGGGTAATAGTTGTTCATGGCAATACTCAACTTGGCCCCCAGGTGTTTACAGTTGCAAAGAATCTAGGGATGATGGGAACTGGTTATGTCTGGATAGCCACTGCTTTCCTCTCTGCTCTGCTTGATATCAACTATCCCCCCTCTCCCGATTCAATGGATGAAATTCAAGGAGTTCTTACACCACGTATCTACACGCCAGATTCACAGCGCAGAAGAAGTTTTGTTACTAGGTGGAAAAACTTGACTAGTGGAAATACTGCCAATGTCAAACTTGGATTGAGTTTTTTACCTCTCTTTGCATATGACACTGTTTATGTACTTGCTCGTGCTCTTGATGCATTTTTCAAAGAAGGTAACCAAATTACATTCTCAACTGATTCAAAGCTATCTAGCATACATGGAAACAACTTGAATCTTGAGGCCTTGAAAATCTTTAGTGAAGGAAATCTGTTACGTAGTAACATCTATGAGGTAAACATGGTTGGTGTATCAGGTCCATTCAAGTTTACATCTGATAGAAACCTTGCTAATCCTGCATATGAAATCATTAATGTGATTGGAACAGGAACTCGGAGGATTGGTTATTGGTCTAATTACTCTGGTTTATCAGTTGTTCCTCCAGAAACTCTTTATTCCAAACCAGTCAATCTTGCTAGGAAAAATCAAAAGCTGTTTCCTGTGATTTGGCCTGGAAACACAGATGAGAGACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAGATTGGAGTACCAAGAGGTGTTAGTTACCAAGAATTTGTCTCACAGATAAAAGGCACTGATATGTTTGAGGGTTTCTGCATTGATGTATTTCTTGCTGCGGTGAATCTGTTGCCTTATGCTGTCCCCTACAGGTTCATCTCATACGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTGTCCGTCTGATCACAACGGGTGAATTTGATGGTGCGGTAGGTGACATTGCAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTGGTAGTAGCACCCGTTGGGAAGGCAGAATCTCATGCTTTGGCCTTTTTGGCCCCTTTTACACCAAAGATGTGGTGTGTCACAGCTATCTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGGGGACCACCCAAAAAACAAGTAGTTACCATTTTATGGTTTAGCTTTTCAACAATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGTGCTGTGTTGATTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTATACGGCAAGTCTAACCTCAATCCTCACAGTGCAACAGCTTTATTATTCCATTAAAGGCATTGAAAGTCTAGTAAATAGCAAAGAACCTATCGGCTACATGCAGGGTTCTTTTGCAAAAAACTATTTAGTTCAGGAAATTCATATTGAGGAGTCCAGGCTAGTTCCTCTGACAACACCAGAAGACATTGCTAGAGCACTGAGAAATGGCCCCAAAAATGGGGGTGTTGCTGCTTACATTGATGAGCGTGCCTACACTGACATCTTCCTCTCTAGCCGTTGTGATTTTACTGTCGTAGGTCAGGAGTTCACGAGAAATGGTTGGGGATTTGCCTTTCCACGGGACTCACCATTAGCAGTTGACCTGTCAACTGCCATATTGCAAATGATAGATAGTGGAGATTTACAAAGGATCCATGACAAATGGCTTTTGAGTAGGGCTTGCTTATCACAAGGGGCAAAGCTCGAAGTGGAAAGACTCCAACTTAAAAGCTTTTGGGGCCTCTATGCTATCTGTGGACTTGCCTGCTTGCTTGCACTCTTCATGTATCTCATACAGATTTTGAAGCAATACCACAAGCACTACTCAAAGGAACCTGAGTCCCCTGACGGCCAAAATGTTGGATCATCAAGATCTTCACGTCTTAAAACTTTCCTTTCATTTGCAGATGAGAAAGAAGAGACTGTTAAGAGCAGGTCCAAGAGAAGGAAAATGGAGAGGATCTCATACAGAACCACTGAAGGAAGCTCATCCATCGACTCGAATAAGGGATATGCATCACGCAGAAGTGAATATGCTAGTGAAGTATTATGA 2820 0.4163 MIKVWPLVFLVLSIGCFSNGRGGQNSTVPDFVNIGALFSFNTSVGRTIKVALEAAFEDINSDPTILGRTKLNLSLQEDSKYRGFLSIAEVLQVMARQTVAIIGPHSSVTAHVITHIANELQVPLLSFSAFDPTLSSLQFPFFIRTCHSDLFQMTAIADLIDYYGWKDVIAVYLDDDNGRNGIGALGDKLAERRCKISYKAALSPQASMEEITNVLVQVALAESRVIVVHGNTQLGPQVFTVAKNLGMMGTGYVWIATAFLSALLDINYPPSPDSMDEIQGVLTPRIYTPDSQRRRSFVTRWKNLTSGNTANVKLGLSFLPLFAYDTVYVLARALDAFFKEGNQITFSTDSKLSSIHGNNLNLEALKIFSEGNLLRSNIYEVNMVGVSGPFKFTSDRNLANPAYEIINVIGTGTRRIGYWSNYSGLSVVPPETLYSKPVNLARKNQKLFPVIWPGNTDERPRGWVFPNNGRLLKIGVPRGVSYQEFVSQIKGTDMFEGFCIDVFLAAVNLLPYAVPYRFISYGDGKNNPSMTELVRLITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVGKAESHALAFLAPFTPKMWCVTAIFFILVGAVVWILEHRVNDEFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRAVLIIWLFVVLIINSSYTASLTSILTVQQLYYSIKGIESLVNSKEPIGYMQGSFAKNYLVQEIHIEESRLVPLTTPEDIARALRNGPKNGGVAAYIDERAYTDIFLSSRCDFTVVGQEFTRNGWGFAFPRDSPLAVDLSTAILQMIDSGDLQRIHDKWLLSRACLSQGAKLEVERLQLKSFWGLYAICGLACLLALFMYLIQILKQYHKHYSKEPESPDGQNVGSSRSSRLKTFLSFADEKEETVKSRSKRRKMERISYRTTEGSSSIDSNKGYASRRSEYASEVL* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01849 939 Gene3D - 583 714 - -
Phac2g01849 939 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Phac2g01849 939 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Phac2g01849 939 FunFam Glutamate receptor 583 713 - -
Phac2g01849 939 FunFam Glutamate receptor 467 583 - -
Phac2g01849 939 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Phac2g01849 939 MobiDBLite consensus disorder prediction 892 939 - -
Phac2g01849 939 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Phac2g01849 939 PIRSF IGluLR_plant 1 937 IPR017103 -
Phac2g01849 939 Pfam Bacterial extracellular solute-binding proteins, family 3 527 812 IPR001638 -
Phac2g01849 939 CDD GluR_Plant 472 812 - -
Phac2g01849 939 Gene3D - 148 425 - -
Phac2g01849 939 MobiDBLite consensus disorder prediction 913 930 - -
Phac2g01849 939 FunFam Glutamate receptor 148 304 - -
Phac2g01849 939 FunFam Glutamate receptor 709 816 - -
Phac2g01849 939 SUPERFAMILY Periplasmic binding protein-like II 449 814 - -
Phac2g01849 939 Gene3D - 50 400 - -
Phac2g01849 939 Gene3D - 759 819 - -
Phac2g01849 939 Gene3D - 466 582 - -
Phac2g01849 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 889 IPR015683 -
Phac2g01849 939 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Phac2g01849 939 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01849 Phac-Chr2 20628376 20633830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01849 5 911 Ion Channels AT3G51480 56.938 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01849 K05387 - gmx:100793320 1650.57