Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01846 ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGTTACCATGCCGTCAGAGTCGCCGATCAGTTTGGTGGCGGCAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACTAAAACTTCTGTTGGTGTAACGGGAAACGGTGAATGGTCCTCACAGAATGTGACCACCCAGTTTACACGGTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCATGAGATTAATTTTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTAATTCAATTGATTGACAACTTTAAGCACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGCTTGATCAAATATAACCGTTATAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCATTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGATCTAAAACCTGAAAACATTCTTCTGTGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGTCTCTCCCCAATTCTAGAGCGGCCTGAGGGAAACCCAAATGGTGGTGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGAAGAGGGTCAATGGGAGGAACTGGAGATATTGCAAAGAATGATAGAAATATTAATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAGTGCGTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAAACAAGACAGTACAGAGCACCTGAAGTTATACTGGCATCTGGATATTCCTTCTCCGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTATTGGTGGAGGTCAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTAGACAAATTGCTGACTGATAGATATAAATTTTCAGTTAAAGATGCTCAAGAGTTTTCAGGATTTCTTCAACCACTCTTTGATTTTGCACCGGAGAAGCGACCAACTGCCCGACAGTGCCTGGAACATCCATGGCTGAACTGCATGGATTCCCCTCCAAATGAAACTGCTAAGGAAAAAGTTGATGATGTTGGGATGAGCAACCTTGAAATCAGGGTGGGAAAGTGA 1389 0.4363 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSVGVTGNGEWSSQNVTTQFTRSFVALKIQKSAAQFVQAALHEINFLSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCILIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNPNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGTGDIAKNDRNINGIDVRCKIVDFGSACWADKQFAEEIQTRQYRAPEVILASGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGGQSKDFFDRHGDLKRIRRLKFCPLDKLLTDRYKFSVKDAQEFSGFLQPLFDFAPEKRPTARQCLEHPWLNCMDSPPNETAKEKVDDVGMSNLEIRVGK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01846 462 Pfam Protein kinase domain 66 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01846 462 Pfam Protein kinase domain 272 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01846 462 SUPERFAMILY Protein kinase-like (PK-like) 34 442 IPR011009 -
Phac2g01846 462 Gene3D Phosphorylase Kinase; domain 1 24 143 - -
Phac2g01846 462 SMART serkin_6 38 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01846 462 FunFam Serine/threonine-protein kinase SRPK 137 433 - -
Phac2g01846 462 Gene3D Transferase(Phosphotransferase) domain 1 112 433 - -
Phac2g01846 462 ProSiteProfiles Protein kinase domain profile. 38 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01846 462 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 260 441 - -
Phac2g01846 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01846 Phac-Chr2 20590864 20594960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01846 4 434 EF-hand Containing Proteins AT5G22840 48.861 5.80e-163 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac2g01846 Pkinase 3.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01846 K08832 - gmx:100784192 786.178