Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01845 ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGTTACCATGCCGTCAGAGTCGCCGATCAGTTTGGTGGCGGCAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACTAAAACTTCTTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCATGAGATTAATTTTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTAATTCAATTGATTGACAACTTTAAGCACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGCTTGATCAAATATAACCGTTATAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCATTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGATCTAAAACCTGAAAACATTCTTCTGTGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGTCTCTCCCCAATTCTAGAGCGGCCTGAGGGAAACCCAAATGGTGGTGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGAAGAGGGTCAATGGGAGGAACTGGAGATATTGCAAAGAATGATAGAAATATTAATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAGTGCGTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAAACAAGACAGTACAGAGCACCTGAAGTTATACTGGCATCTGGATATTCCTTCTCCGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTATTGGTGGAGGTCAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTAGACAAATTGCTGACTGATAGATATAAATTTTCAGTTAAAGATGCTCAAGAGTTTTCAGGATTTCTTCAACCACTCTTTGATTTTGCACCGGAGAAGCGACCAACTGCCCGACAGTGCCTGGAACATCCATGGCTGAACTGCATGGATTCCCCTCCAAATGAAACTGCTAAGGAAAAAGTTGATGATGTTGGGATGAGCAACCTTGAAATCAGGGTGGGAAAGTGA 1329 0.4327 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAQFVQAALHEINFLSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCILIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNPNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGTGDIAKNDRNINGIDVRCKIVDFGSACWADKQFAEEIQTRQYRAPEVILASGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGGQSKDFFDRHGDLKRIRRLKFCPLDKLLTDRYKFSVKDAQEFSGFLQPLFDFAPEKRPTARQCLEHPWLNCMDSPPNETAKEKVDDVGMSNLEIRVGK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01845 442 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Phac2g01845 442 FunFam Serine/threonine-protein kinase SRPK 117 413 - -
Phac2g01845 442 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Phac2g01845 442 CDD STKc_SRPK 27 413 - -
Phac2g01845 442 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Phac2g01845 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Phac2g01845 442 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01845 442 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01845 442 SUPERFAMILY Protein kinase-like (PK-like) 34 422 IPR011009 -
Phac2g01845 442 FunFam Protein kinase superfamily protein 24 123 - -
Phac2g01845 442 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 205 - -
Phac2g01845 442 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01845 442 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01845 Phac-Chr2 20590599 20594960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01845 4 414 EF-hand Containing Proteins AT5G22840 50.972 1.23e-167 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac2g01845 Pkinase 3.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01845 K08832 - gmx:100784192 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01845 2 20590599 20594960 Phac2g01845 2 20590599 20594960 ECH
Phac2g01845 2 20590599 20594960 Phac3g04239 3 41077814 41082702 PCT