Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01824 ATGGATTTCTCGCAGACCAACAAAACCACTTTGCTCACCAACCTACTAGTCTTCAACAACACCGTCCAACCAGAGTTGATGAGGAGCCTGCATGTGTACCGGCAAGGAGATGGGGAGGAAAGGGCAGTTGAGAGGGAGTTTGTGTTTTCAGACTGTGGCTCCTATCGGGAAATGCAGGCTACCCCAATTCTTAGATTGGTGAAATCCCATGTTTCTGAAGTGTGCGAAGGGTACAAAAATGGAGTGTGGCTTTGTATCTTAGCGTTTCATGCCGATCACACTCCTCAATTTTGCCACATTCCTCCGCTTTTGTTGGCCTCAAGAAACCCAAAGCTTCAGATGATTCCAAACTTGCTCCGTGATCTCCACATGATCTACAAGTTGGACAGGAAGGAGGAAGACAGAGATACAACTCTAGGCTCTACAGGGGAAGAATGTCAAGGGAACAGCAACAATTTCCAACCATCAGAAAAAGTCTTTCCCGTTCTTGATCAGGATCTCAATTATCTTCCTTATGAAGAAGACGAGTCTGAGTTACTGGACAATGAGACAGATGTTGAAAGCTCACCAGGTTTGCCAGGGAAAAAAAAGAGGGCACCCAGTGACCTTGTAGCAAAAATTTCCTTATCAGATTTGGTCCAGTACTTTGGCATGCCTATCGTAGAAGCATCAAGAAATCTAAAAGTTGGGCTTACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGGATTCCCCGCTGGCCTCATAGGAAGATCAAGTCACTTGACAGTCTCATTCAGGATCTTCAGGAAGAGGCACAGAACCAAGAATTGGAGAACATGGAAGCAGCAATGGCAGTGGCCAAGAGACAAAAGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATTCAAAGTGAGACCAAGAGGTTCCGGCAAGATGTTTTCAAGAGAAGACACAGAGCAAGAGCTGTTGGAAAACAGAATCCTACTGTATCCAACACATAG 999 0.4494 MDFSQTNKTTLLTNLLVFNNTVQPELMRSLHVYRQGDGEERAVEREFVFSDCGSYREMQATPILRLVKSHVSEVCEGYKNGVWLCILAFHADHTPQFCHIPPLLLASRNPKLQMIPNLLRDLHMIYKLDRKEEDRDTTLGSTGEECQGNSNNFQPSEKVFPVLDQDLNYLPYEEDESELLDNETDVESSPGLPGKKKRAPSDLVAKISLSDLVQYFGMPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDSLIQDLQEEAQNQELENMEAAMAVAKRQKMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAVGKQNPTVSNT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01824 332 Coils Coil 251 290 - -
Phac2g01824 332 PANTHER PROTEIN RKD4 95 324 IPR044607 GO:0003700
Phac2g01824 332 MobiDBLite consensus disorder prediction 177 198 - -
Phac2g01824 332 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Phac2g01824 332 Pfam RWP-RK domain 207 254 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01824 Phac-Chr2 20434998 20440499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01824 22 332 AtRKD Transcription Factor Family AT4G35590 48.012 5.42e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac2g01824 RWP-RK 3.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01824 - - gmx:113001653 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01824 2 20434998 20440499 Phac2g01824 2 20434998 20440499 ECH