Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01820 ATGAGGAGGTTGAAGGAGTTTAGTTTCGCGGAGCTGAAAGCAGCTACGAAGAGTTTCAAGTCGGATGCGTTGCTTGGAGAAGGAGGTTTTGGGAAAGTTTACAAAGGATGGTTGGATGAGAAAACTCTGACACCAACCAAAGCTGGTTCTGGAATCATGGTAGCTATCAAAAAGTTGAATCCCGAAAGTATGCAGGGCCTTCAAGAGTGGCAGTCAGAAATAAATTTTTTAGGAAGAGTTTCTCACCCAAACCTGGTGAAGCTTTTGGGTTACTGCTGTGACGATGTGGAGTTTCTCCTTGTGTACGAATTCATGCCAAAGGGAAGCTTGGAGACTCATCTATTTTGGAGTGGTAACACAGTACCACTGTCTTGGGACACTCGACTCAAAATAGCTATTGGTGCAGCTCGGGGCTTGGCTTACTTGCACACCTCAGAGAAGCAAATCATATATAGAGATTTCAAAGCCTCCAATATACTACTCGATGAGGAGTTCAATGCGAAAATATCAGATTTTGGTTTGGCCAAATTAGGCCCTTCTGTGGGAGATTCACACGTGACTACCAGGATCATTGGAACATATGGCTATGCTGCTCCCGAATACATTGCAACAGGTCACCTTTATGTGAAAAGTGATGTTTATGGATTTGGTGTGGTGCTGCTTGAATTGCTGAAAGGGATGCGGGCACTTGATGTAAATCGCCCTTCAGGGCAGCAAAATCTGGTTGAGTGGATCAAACCTTATCTATCTGATAAAACCAAGTTGAAAAGTGATATTATGGATGAGAAGATTGAGGGTCAGTATTCAACCAAGGCAGCACTGAAAGCAGCACAACTTACTCTGGAATGCCTTCAAAATGACCGTAATAAACGTCCTTCTATGAAAGATGTTCTTCATACATTGGAAAGCATCCAAGCTATCAAGGTTAGAAGGAGGAAAAGAAACAAACATTGTTCTAAGTTTGCAGCTATGAACAATTTCCAATAG 987 0.4255 MRRLKEFSFAELKAATKSFKSDALLGEGGFGKVYKGWLDEKTLTPTKAGSGIMVAIKKLNPESMQGLQEWQSEINFLGRVSHPNLVKLLGYCCDDVEFLLVYEFMPKGSLETHLFWSGNTVPLSWDTRLKIAIGAARGLAYLHTSEKQIIYRDFKASNILLDEEFNAKISDFGLAKLGPSVGDSHVTTRIIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLELLKGMRALDVNRPSGQQNLVEWIKPYLSDKTKLKSDIMDEKIEGQYSTKAALKAAQLTLECLQNDRNKRPSMKDVLHTLESIQAIKVRRRKRNKHCSKFAAMNNFQ* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01820 328 FunFam Serine/threonine-protein kinase BIK1 1 104 - -
Phac2g01820 328 FunFam Serine/threonine-protein kinase PBS1 105 319 - -
Phac2g01820 328 Gene3D Transferase(Phosphotransferase) domain 1 105 326 - -
Phac2g01820 328 Pfam Protein tyrosine and serine/threonine kinase 22 301 IPR001245 GO:0004672|GO:0006468
Phac2g01820 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Phac2g01820 328 ProSitePatterns Protein kinases ATP-binding region signature. 25 58 IPR017441 GO:0005524
Phac2g01820 328 CDD STKc_IRAK 25 304 - -
Phac2g01820 328 ProSiteProfiles Protein kinase domain profile. 19 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01820 328 PANTHER OS01G0588500 PROTEIN-RELATED 3 305 - -
Phac2g01820 328 Gene3D Phosphorylase Kinase; domain 1 3 104 - -
Phac2g01820 328 SUPERFAMILY Protein kinase-like (PK-like) 5 306 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01820 Phac-Chr2 20430138 20433282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01820 7 301 Glycoside Hydrolase AT3G07070 51.342 2.74e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac2g01820 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01820 - - gmx:100778116 549.666