Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01817 ATGGGTCTCTGCTTTGCTTCTCTCGCTCCTCGCCAAACACCCTCTAGTTCTCTTCCCTATTCCGGGCGTGAAGGCACAAGTGTTGATGGAGGAAGCAGTAGTAGTATCAGCAGTAGCAATAACGCTGTGTTTCCGAGAGTTGAAACGAGGAACTTGAAGCAGTTCAATTTTGCGGATCTGAAAGCGGCAACGAAGAGTTTCAGGTCCGATGTATTGCTTGGAGAAGGGGGCTTTGGGAAAGTTTACAAAGGATGGTTGGATGAGAAAACTCTGACACCAACCAAAGCTGGATCTGGAATGGTAGTTGCTGTTAAGAAATTGAATTCCGAGAGTGTGCAGGGATTTCGAGAGTGGCAGTCAGAAATCAATTTTTTAGGAAGAATTTCTCACCCAAACCTGGTCAAGCTTTTGGGTTACTGTTGTGACGATGTGGAATTTCTACTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTATTTAGAAGAAATACTAGCACAGAAACACTGTCTTGGAACACCCGAATCAAAATAGCTATTGGTGCAGCTAGAGGCTTGGCTTTCTTACACACCTCAGAAAAGCAGCAAATCATATACAGAGATTTCAAAGCCTCCAATATATTACTTGATGAGGATTACAATGCAAAAATTTCAGATTTTGGGTTGGCCAAATTAGGCCCTTCTGGGGGATATTCACACGTGACTACCAGGATCATGGGCACATATGGGTATGCTGCTCCAGAATACGTTGCAACAGGCCACTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTGCTGCTTGAAATTCTGACAGGGTTGAGGGCACTTGATAGAAATCGCCCCTTAGAGCAGCAGAATCTGATTGAATGGGCTAAGCCTTCTCTTTCTGATAAAAGAAAGTTGAAAAGCATAATGGATGAGAGAATAGAGGGTCAGTATTCAACAAAGGCAGCAATGCGAGCAGCACATTTAACTCTAAAATGCCTTCAACGTGACCATAGAAAACGTCCTCCCATGAAAGATGTTCTGGAAACATTGGAACGCATCGAAGCTATCAACGATAGAAGATAA 1083 0.4321 MGLCFASLAPRQTPSSSLPYSGREGTSVDGGSSSSISSSNNAVFPRVETRNLKQFNFADLKAATKSFRSDVLLGEGGFGKVYKGWLDEKTLTPTKAGSGMVVAVKKLNSESVQGFREWQSEINFLGRISHPNLVKLLGYCCDDVEFLLVYEFMPKGSLENHLFRRNTSTETLSWNTRIKIAIGAARGLAFLHTSEKQQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGYSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEILTGLRALDRNRPLEQQNLIEWAKPSLSDKRKLKSIMDERIEGQYSTKAAMRAAHLTLKCLQRDHRKRPPMKDVLETLERIEAINDRR* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01817 360 Pfam Protein tyrosine and serine/threonine kinase 72 350 IPR001245 GO:0004672|GO:0006468
Phac2g01817 360 Gene3D Transferase(Phosphotransferase) domain 1 153 359 - -
Phac2g01817 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 106 IPR017441 GO:0005524
Phac2g01817 360 Gene3D Phosphorylase Kinase; domain 1 29 152 - -
Phac2g01817 360 ProSiteProfiles Protein kinase domain profile. 67 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01817 360 SUPERFAMILY Protein kinase-like (PK-like) 41 352 IPR011009 -
Phac2g01817 360 MobiDBLite consensus disorder prediction 9 40 - -
Phac2g01817 360 CDD STKc_IRAK 73 353 - -
Phac2g01817 360 FunFam Serine/threonine-protein kinase BIK1 33 152 - -
Phac2g01817 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Phac2g01817 360 FunFam Serine/threonine-protein kinase PBS1 153 360 - -
Phac2g01817 360 PANTHER OS01G0588500 PROTEIN-RELATED 41 354 - -
Phac2g01817 360 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01817 Phac-Chr2 20419351 20422082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01817 53 350 Glycoside Hydrolase AT3G07070 50.000 2.68e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac2g01817 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01817 - - gmx:100777578 608.216