Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01805 ATGGACTTATCAGTAGAAAGTACAAGACCACGTTACACCTACAGCGCGACAACGTTCGGGATGAATGAGCGTATGAGATACAACATCTCCATATCTGGTTCCACTGTGACCACTACTCTGAATCCTGCTACTATTTTCAGATTCACCATCAAAGTTTTTCTTCAAAATGAACCTCGAATTCCAATACATTATCGCTCTTCTACTCCAATACCGAGCCAAACCTTCTTCCAAGAGGGTCTATGTTTCTTGCGGACACTGTTATCATCATTATCATCGCACAGACTCTTCAGCGCTGAGGCTATTGAGGACATAGTAGAGTTGGTTGCTTCTGAAGTTCGCGATATCTTCCAAGTTGATGATGCTGGTCCTTCTTCTTCGGAATATCAACCGCCAGAAATTCCTCTGTGGGTTGTAATCAATGTTGCTGATAACAGCATGCTTGCGGCAAGGCAAGACCCTGCGGCACTTACTTTGAGAATGGTTCCAGCAACGACAGAAGCCATTGAAACGTTGGTGAAGAAATCTACGGTTGTGGAGAGTGAGTGTTATTGTTCAGTATGCTTGGAAGAAGTGGTTGTGAATGGTGAGTGCTACACACTGCCATGTAATCACTTCTTTCATAAAAAATGTATTGTGCGCTGGCTATACACCAGTCACACCTGCCCCTTGTGTCGCTACCCTCTGCCAGTTTCAAAAGAGTAG 702 0.443 MDLSVESTRPRYTYSATTFGMNERMRYNISISGSTVTTTLNPATIFRFTIKVFLQNEPRIPIHYRSSTPIPSQTFFQEGLCFLRTLLSSLSSHRLFSAEAIEDIVELVASEVRDIFQVDDAGPSSSEYQPPEIPLWVVINVADNSMLAARQDPAALTLRMVPATTEAIETLVKKSTVVESECYCSVCLEEVVVNGECYTLPCNHFFHKKCIVRWLYTSHTCPLCRYPLPVSKE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01805 233 SUPERFAMILY RING/U-box 167 230 - -
Phac2g01805 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 231 IPR013083 -
Phac2g01805 233 SMART ring_2 184 224 IPR001841 -
Phac2g01805 233 CDD RING-H2_PA-TM-RING 184 225 - -
Phac2g01805 233 ProSiteProfiles Zinc finger RING-type profile. 184 225 IPR001841 -
Phac2g01805 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 102 229 - -
Phac2g01805 233 SMART ringv_2 183 225 IPR011016 GO:0008270
Phac2g01805 233 Pfam Ring finger domain 183 225 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01805 Phac-Chr2 20266534 20267326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01805 153 232 C3H Transcription Factor Family AT3G02340 39.506 2.63e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01805 - - vum:124843592 237.269