Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01761 ATGGAGTGCATGGAAGCAGCTTTGAAGAGCAATTTTAGGAAAGAAATGACTGTGGAACTCAGTCCAGAAACCTTCATGGAGGAGTTCAGTGTGCAAAACGGTACCACTTGCGACGACTTTTTCGTGGACGACCTTCTTGACTTCTCGCACGTCGAAGAAGAACCAGAACAACAGAAGGAACAAGACTCGGTTTGTCTATCCCTTCAAAAAGAAAACCCAAGCCAAGAACCCTATGTTTTCAAACCCGATTATTCCTCTGTGCCCACCACCGAGCTTAGCGTTCTGGCGGATGACGTGGCGGACTTTGAGTGGTTGTCTCATTTCGTGGAGGAATCCTTCTCGGAATTCTCTGCGGCGCTCCCCACCGTAACAGAGAACAACCCGACGGGCCTTGCGGCGAAAGAGCCAAAGCCCGAACCGGAGAGCCCGGTTTTCACTTTCAAAACCCCGGTTCAGACCAAAGCGAGAAGCAAGCGAAACAGGAACGGTGTTCGTGTTTGGCCGCTCGGTTCCCCTTCCTTCACCGAATCTTCCTCCAGCTCCACCACCACCACCTCATCATCTTCCTCCTCCTCCCCCTCCAGCCCCTTGCTAATTTACACCAACATCCCTCGTAGCCTCGACCCCGTTTGTTCCGAGCCCAAACCCAATAAGCCGAAGAAAAAACACTCTTCCGACAGTGTGGGCACCCTGGCGCCGCGACGGTGCAGTCACTGCGGCGTGCAGAAAACCCCTCAGTGGCGAACTGGGCCGCTCGGCCCAAAAACGCTCTGTAACGCATGCGGGGTCCGCTTCAAGTCGGGACGGCTCCTACCCGAATATAGGCCCGCTTGCAGCCCAACATTCTCCAGCGAATTACACTCCAATCATCATCGTAAAGTGCTCGAGATGCGGCACAAGAAGGAGATGGTAACTGGGACTGAAAATGGTTTTACGCCTGCTCCTGTTCCCAAATTTTGA 960 0.5344 MECMEAALKSNFRKEMTVELSPETFMEEFSVQNGTTCDDFFVDDLLDFSHVEEEPEQQKEQDSVCLSLQKENPSQEPYVFKPDYSSVPTTELSVLADDVADFEWLSHFVEESFSEFSAALPTVTENNPTGLAAKEPKPEPESPVFTFKTPVQTKARSKRNRNGVRVWPLGSPSFTESSSSSTTTTSSSSSSSPSSPLLIYTNIPRSLDPVCSEPKPNKPKKKHSSDSVGTLAPRRCSHCGVQKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRHKKEMVTGTENGFTPAPVPKF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01761 319 ProSiteProfiles GATA-type zinc finger domain profile. 230 266 IPR000679 GO:0006355|GO:0043565
Phac2g01761 319 MobiDBLite consensus disorder prediction 214 228 - -
Phac2g01761 319 Pfam GATA zinc finger 236 270 IPR000679 GO:0006355|GO:0043565
Phac2g01761 319 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 292 - -
Phac2g01761 319 MobiDBLite consensus disorder prediction 171 201 - -
Phac2g01761 319 PIRSF Txn_fac_GATA_plant 1 314 IPR016679 GO:0003677|GO:0005634|GO:0045893
Phac2g01761 319 MobiDBLite consensus disorder prediction 127 233 - -
Phac2g01761 319 CDD ZnF_GATA 235 283 IPR000679 GO:0006355|GO:0043565
Phac2g01761 319 Gene3D - 230 304 IPR013088 GO:0006355|GO:0008270
Phac2g01761 319 FunFam GATA transcription factor 225 311 - -
Phac2g01761 319 PANTHER GATA TRANSCRIPTION FACTOR 33 303 - -
Phac2g01761 319 ProSitePatterns GATA-type zinc finger domain. 236 261 IPR000679 GO:0006355|GO:0043565
Phac2g01761 319 SMART GATA_3 230 284 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01761 Phac-Chr2 19750439 19752922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01761 5 319 C2C2-Gata Transcription Factor Family AT5G66320 48.980 2.17e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac2g01761 GATA 1.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01761 - - var:108335072 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04066 3 40080255 40082704 Phac2g01761 2 19750439 19752922 ECH
Phac2g01761 2 19750439 19752922 Phac2g01761 2 19750439 19752922 ECH
Phac2g01761 2 19750439 19752922 Phac3g04066 3 40080255 40082704 PCT