Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01750 ATGCGAACGCTTTGTGATGCTTGTGAGAGTGCGGCGGCTATAGTTTTCTGCGCCGCTGATGAGGCTGCACTTTGTCGTGCCTGCGATGAGAAGGTTCACATGTGCAATAAGCTTGCTAGTAGACATGTGAGAGTTGGTCTTGCAAGTCCAAGTGATGTGCCACGGTGTGACATATGTGAGAATGCACCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCCCTTTGTTTGCAGTGTGATATGATAGTTCATGTTGGAGGTAAAAGAACGCATGGAAGATATCTTCTGTTCAGGCAAAGAGTTGAGTTTCCAGGAGACAAATCTAGTCATGCTGAAAATCCGGGTTCACAACCATTGGAACCTGGTGAGAGTAAAAGAGGACAAAATCCACTTCCCAAACTAAAAATGGGAGAGAAGCAGCAAAATCATGGGATGCCTCTGCTTCCAACACCAGGACCTGATGCTGATGGGCATACCAAGATGGAAACTAAAATGATTGATTTGAACATGAAGCCTAACAGATTGCATGAACAGGCATCAAATAATCAGGTTAGAGTGCGTGGGAAGTAA 570 0.4474 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPGSQPLEPGESKRGQNPLPKLKMGEKQQNHGMPLLPTPGPDADGHTKMETKMIDLNMKPNRLHEQASNNQVRVRGK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01750 189 SMART bboxneu5 51 96 IPR000315 GO:0008270
Phac2g01750 189 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac2g01750 189 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Phac2g01750 189 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 131 - -
Phac2g01750 189 MobiDBLite consensus disorder prediction 157 171 - -
Phac2g01750 189 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac2g01750 189 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
Phac2g01750 189 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Phac2g01750 189 Gene3D Classic Zinc Finger 2 91 - -
Phac2g01750 189 MobiDBLite consensus disorder prediction 105 189 - -
Phac2g01750 189 MobiDBLite consensus disorder prediction 174 189 - -
Phac2g01750 189 FunFam B-box zinc finger protein 19 2 92 - -
Phac2g01750 189 CDD Bbox1_BBX-like 56 96 - -
Phac2g01750 189 CDD Bbox1_BBX-like 4 47 - -
Phac2g01750 189 SUPERFAMILY B-box zinc-binding domain 48 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01750 Phac-Chr2 19506014 19509228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01750 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 61.202 7.08e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Phac2g01750 zf-B_box 2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01750 - - gmx:100780544 376.711