Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01741 ATGCCTGTTCTTCTTCTCCTAGTGCTGTTGTGCGCACCCCTCTTAACGTGCGCCGATCGCAGCGCCGTTACTGTTGTGGAGATCCAAGCCTTGACGTCTTTCAAGCTTAACCTTCACGACCCCGTCGGAGCTCTCGACGGTTGGGATCCAACGTCGCCGGCGGCACCCTGCGACTGGCGCGGAGTAGCCTGCACCAATAGCCGAGTCACGGAGTTGCGCCTGCCTCGCCTTCAACTGGGTGGCAGACTCAGTGAGCGTGTCTCCGAGTTGCGCATGTTACGCAAGATAAGTCTTCGTTCCAACAACTTCAACGGAAGCATTCCTTCGTCACTCTCCAAATGCACGCTTTTATGGTCATTGTTCCTTCAGGATAATTCGTTTTCCGGCAACCTTCCGACGGAGATCGCAAACCTCACCGGCCTTAAGATTCTCAACGTCGCGCTAAACCGCCTCTCCGGCAGTATCCCCGGCATTCTCCCTCTCGGCCTCAAAGCCCTCGACCTCTCGTCGAACGCCTTCTCCGGCGCGATTCCGAGCTCCATAGCGAACCTATATCAGCTTCAGTTGATAAACCTGTCGTATAACCATTTTTCCGGCGAGATCCCGGCGAGCCTCGGGGAGCTTCAGCAGCTGCAGTACCTCTGGCTGGACCACAATCTCCTCGGAGGAACGCTTCCTTCGGCGCTCGCAAATTGCTCCGCGCTTCTGCATCTGAGCGTGGAAGGAAACGCGCTTACCGGCGAGATTCCGTCGGCGATTTCAGTGCTCCCGAAACTTCAGGTGATGTCGCTCTCTCAGAATAACTTCACCGGCTCCATTCCAGCTTCCATTTTGTGCAACGGTTCGGTTCACGCGCCGTCGCTGCGGATTGTTCACCTCAGTTTCAACGGGTTCGTTGATTTCGTGGGACCTGGGATGAGCACGTGTATCAGTGTTCTTCAGGTTTTGGATATTCAGCACAATCGCATACGAGGCACGTTCCCGTTGTGGTTGACCAACGTGACCACGTTAACCGTGCTTGATGTGTCGAACAATGCACTTTTTGGGGAGGTTCCGCCTCAAATAGGAAACCTTGTGAAGTTGGAGGTTTTGAAGATGGCTAATAATTCCTTCACCGGTACCATTCCGGTAGAACTGAAGAAATGTGGGTTCCTAAGTGTCGTTGACTTTGAAGGCAACGAGTTTGGCGGAGAAGTTCCTTCGTTTTTGGGTGATGTGACGGGGCTGAGGGTGCTATCTCTCGGTGGGAACCACTTCTCTGGTTCTGTTCCGGTGAGTTTTGGAAACCTTTCTTTTCTTGAAATGTTGAGTTTGAGAGGTAACAGGTTGAATGGAAGTATGCCTGAGATGATAATGAGATTGAACAATTTGACGATACTGGATCTTAGTGGAAACAAATTTACGGGTCAAGTTTATGCGAGTATTGGGAATTTGAATAAGTTGATGGTTCTCAATCTTAGTGGCAATGGCTTCTCTGGAAAAATTCCTTCTAGTTTGGGGAATCTTTTTAAGCTAACTACGCTTGACTTGAGCAAACAGAATCTTTCTGGAGAGTTACCGCTTGAGCTCTCGGGATTGCCCAGTTTGCAAGTTGTTGCACTGCAGGAAAACAAGTTATCTGGTGATGTGCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCAGTATGTTAATCTCAGTTCTAATGCCTTTTCCGGGAATATTCCTGAAAATTATGGCTTTCTTCGTTCCTTGCTTGTTCTTTCGTTGTCTGATAATGACATTACAGGAGCAATCCCTTCGGAAATTGGAAACTGCTCTGGTATTGAAATTCTTGAGCTTGGATCAAACTCTCTGGCAGGTAGCATTCCTGCTGATCTCTCTCGTCTCACCCTTTTGAGAATGCTTGATTTGAGTGGAAACAATTTAACTGGGGACGTGCCTGCGGAAATCTCCAAATGCTCGGGGCTAACCACTTTGCTGGTGGATCACAACCGTCTTTCCGGGGATATTCCTGGGTCCTTGTGGAATCTACCAAACCTGACAATGCTAGATCTCTCTGCTAACAACTTGAGTGGGGAAATTCCAAGCAATCTTTCTATGATTCCCAGTCTAGTGTTCTTAAATGTCTCGGGAAATAACTTGGACGGTGAGATACCACCAACATTGGGATCTCGGTTCAGTAACCCCGATGTATTCGCAGATAATCCAGGTTTATGTGGGAAGCCATTGGATACGAAATGCGAAGATATAGATAATGGTAAGGACAGAAAGAGGATGATTGTGCTTGTGGTTGTCGTTGCTTGTGGAGCTTTTGTACTGGTTTTGTTTTGCTGCTTCTACGTGTTCAGTCTACTGAGATGGCGTAAAAGACTGAAACAGGGAGTATCGGGTGAAAAGAAAAAGAGTCCCGCCAGAGCCAGTTCTGGAACAAGTGGAGGTCGTAGCAGCAGCACTGAGAGTGGGGGACCAAAACTAGTGATGTTCAACACCAAAGTTACACTTGCTGAGACCATTGAAGCAACAAGACAATTTGACGAAGAGAACGTGCTGAGCAGAACAAGGTATGGATTAGTGTTCAAAGCCTGTTACAACGATGGAATGGTCCTTTCCATTCGCAGGCTCCAAGATGGATCATTGGATGAAAACATGTTTAGAAAAGAAGCCGAATCACTAGGCAAAGTGAAGCACCGAAATTTAATAGTTCTGAGAGGTTACTATGCTGGGCCACCTGACATGAGACTCCTAGTATACGATTACATGCCTAATGGAAACCTCGCAACCCTCCTCCAAGAAGCTTCTCACCAAGATGGCCACGTTCTAAATTGGCCAATGCGACACCTCATTGCACTGGGCATTGCCCGTGGTTTAGCCTTCCTACACCAATCCTCAATGGTTCACGGCACCGTTAAACCACAAAATGTCCTATTCGATGCAGATTTCGAAGCCCATTTATCAGATTTCGGGTTAGAAAAGTTAACAATAGCCACGACCCCAGGCGAAGCCTCAACTTCAGCATCCGTTGGCGCATTGGGTTACGTTTCTCCAGAAGCAGTCTTAACCGGGGAAGCCACAAAGGAGAGTGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTGCTGACTGGAAAACGACCCGTCATGTTCACCCAGGACGAAGACATAGTGAAGTGGGTAAAAAAACAACTGCAAAGGGGTCAAATAACAGAGCTATTAGAACCGGGTTTGCTTGAGTTGGACCCTGAATCATCAGAGTGGGAAGAGTTTTTACTGGGTGTAAAAGTTGGGTTACTTTGCACAGCACCCGACCCTCTTGATCGACCAACCATGTCTGACATTGTTTTCATGCTCGAAGGCTGCCGAGTTGGTCCTGATATCCCATCCTCTGCAGATCCCACCTCCCAACCTTCTCCGGTGTAA 3396 0.4829 MPVLLLLVLLCAPLLTCADRSAVTVVEIQALTSFKLNLHDPVGALDGWDPTSPAAPCDWRGVACTNSRVTELRLPRLQLGGRLSERVSELRMLRKISLRSNNFNGSIPSSLSKCTLLWSLFLQDNSFSGNLPTEIANLTGLKILNVALNRLSGSIPGILPLGLKALDLSSNAFSGAIPSSIANLYQLQLINLSYNHFSGEIPASLGELQQLQYLWLDHNLLGGTLPSALANCSALLHLSVEGNALTGEIPSAISVLPKLQVMSLSQNNFTGSIPASILCNGSVHAPSLRIVHLSFNGFVDFVGPGMSTCISVLQVLDIQHNRIRGTFPLWLTNVTTLTVLDVSNNALFGEVPPQIGNLVKLEVLKMANNSFTGTIPVELKKCGFLSVVDFEGNEFGGEVPSFLGDVTGLRVLSLGGNHFSGSVPVSFGNLSFLEMLSLRGNRLNGSMPEMIMRLNNLTILDLSGNKFTGQVYASIGNLNKLMVLNLSGNGFSGKIPSSLGNLFKLTTLDLSKQNLSGELPLELSGLPSLQVVALQENKLSGDVPEGFSSLTSLQYVNLSSNAFSGNIPENYGFLRSLLVLSLSDNDITGAIPSEIGNCSGIEILELGSNSLAGSIPADLSRLTLLRMLDLSGNNLTGDVPAEISKCSGLTTLLVDHNRLSGDIPGSLWNLPNLTMLDLSANNLSGEIPSNLSMIPSLVFLNVSGNNLDGEIPPTLGSRFSNPDVFADNPGLCGKPLDTKCEDIDNGKDRKRMIVLVVVVACGAFVLVLFCCFYVFSLLRWRKRLKQGVSGEKKKSPARASSGTSGGRSSSTESGGPKLVMFNTKVTLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLIVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGTVKPQNVLFDADFEAHLSDFGLEKLTIATTPGEASTSASVGALGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPV* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01741 1131 SUPERFAMILY RNI-like 399 722 - -
Phac2g01741 1131 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Phac2g01741 1131 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Phac2g01741 1131 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Phac2g01741 1131 Pfam Leucine rich repeat 648 707 IPR001611 GO:0005515
Phac2g01741 1131 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Phac2g01741 1131 Gene3D Ribonuclease Inhibitor 160 248 IPR032675 -
Phac2g01741 1131 MobiDBLite consensus disorder prediction 789 817 - -
Phac2g01741 1131 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 162 253 - -
Phac2g01741 1131 ProSiteProfiles Protein kinase domain profile. 837 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01741 1131 FunFam Putative LRR receptor-like serine/threonine-protein kinase 800 912 - -
Phac2g01741 1131 SMART LRR_sd22_2 670 693 - -
Phac2g01741 1131 SMART LRR_sd22_2 622 651 - -
Phac2g01741 1131 SMART LRR_sd22_2 334 360 - -
Phac2g01741 1131 SMART LRR_sd22_2 208 234 - -
Phac2g01741 1131 SMART LRR_sd22_2 454 480 - -
Phac2g01741 1131 SMART LRR_typ_2 622 646 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 256 280 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 334 358 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 670 701 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 138 161 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 478 502 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 406 429 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 526 549 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 430 453 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 454 477 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 208 232 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 90 114 IPR003591 -
Phac2g01741 1131 SMART LRR_typ_2 574 598 IPR003591 -
Phac2g01741 1131 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 913 1117 - -
Phac2g01741 1131 Pfam Protein kinase domain 847 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01741 1131 SUPERFAMILY Outer arm dynein light chain 1 68 198 - -
Phac2g01741 1131 SUPERFAMILY L domain-like 163 509 - -
Phac2g01741 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 621 740 - -
Phac2g01741 1131 Gene3D Transferase(Phosphotransferase) domain 1 913 1117 - -
Phac2g01741 1131 FunFam Uncharacterized protein 256 472 - -
Phac2g01741 1131 SUPERFAMILY Protein kinase-like (PK-like) 817 1119 IPR011009 -
Phac2g01741 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 473 567 - -
Phac2g01741 1131 Gene3D Ribonuclease Inhibitor 453 743 IPR032675 -
Phac2g01741 1131 Pfam Leucine Rich Repeat 480 502 IPR001611 GO:0005515
Phac2g01741 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 403 1111 - -
Phac2g01741 1131 FunFam Nuclear pore complex protein NUP107 24 161 - -
Phac2g01741 1131 Gene3D Ribonuclease Inhibitor 350 451 IPR032675 -
Phac2g01741 1131 Gene3D Ribonuclease Inhibitor 249 349 IPR032675 -
Phac2g01741 1131 Gene3D Ribonuclease Inhibitor 25 159 IPR032675 -
Phac2g01741 1131 PRINTS Leucine-rich repeat signature 625 638 - -
Phac2g01741 1131 PRINTS Leucine-rich repeat signature 670 683 - -
Phac2g01741 1131 Gene3D Phosphorylase Kinase; domain 1 806 912 - -
Phac2g01741 1131 MobiDBLite consensus disorder prediction 796 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01741 Phac-Chr2 19413788 19418667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01741 3 1131 Receptor kinase-like Gene Family AT4G36180 68.190 0.0 1479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Phac2g01741 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01741 - - gmx:100795838 1912.12