Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01738 ATGGTTGATTTCAGCGGCGATGAAACTGCTCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCCCTCGTTTTTTCCTGCATGGGTGCGGCGTACGGCACGGCGAAGAGCGGCGTTGGTGTTGCCTCGATGGGCGTGATGAGGCCGGAGTTGGTGATGAAATCGATTGTGCCGGTTGTGATGGCGGGAGTGCTGGGCATCTACGGCTTGATCATCGCGGTGATCATCAGCACGGGCATTAACCCTAAGGCAAAATCCTACTATCTCTTCGACGGCTACGCTCATCTCTCTTCTGGTCTCGCTTGCGGTCTCGCGGGTCTCTCCGCTGGCATGGCCATTGGCATCGTTGGCGACGCCGGTGTTAGCTGTGCAGGATAG 375 0.592 MVDFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVSCAG* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01738 124 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Phac2g01738 124 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Phac2g01738 124 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phac2g01738 124 SUPERFAMILY F1F0 ATP synthase subunit C 86 121 IPR035921 -
Phac2g01738 124 SUPERFAMILY F1F0 ATP synthase subunit C 12 76 IPR035921 -
Phac2g01738 124 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 121 - -
Phac2g01738 124 Gene3D - 10 124 IPR035921 -
Phac2g01738 124 FunFam V-type proton ATPase proteolipid subunit 10 124 - -
Phac2g01738 124 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 124 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac2g01738 124 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac2g01738 124 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01738 Phac-Chr2 19389186 19391723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01738 1 121 Primary Pumps ATPases(2) AT2G16510 97.521 2.34e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01738 K02155 - dct:110110952 211.46