Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01735 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTACTATCTGAGGAAGAAGGTGGCTTCCCAAAAGATTGACCTTGACGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGATAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCGGGGTTTTGGAAAGCTACAGGAAGAGACAAAGCAGTGTATGACAAGGCAAAACTAATTGGGATGAGAAAAACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGGCAGAAATCTGATTGGATCATGCACGAGTATAGACTTGAATCGGATGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAAAAAACCACTGGACAAACAAAGACTAGTGAAGGATGGGACTCAAGCTACTTCTTTGAGGAAGCAAGTGGGTTAAGCACTGTGGTTGATCCAATTGATCTCATTTCAAGGCAGTCTCACAGCTTTTTAGCTCAAAATTTCATGTGTAAGCAAGAGATAGAAGCAGATAACTTGAGTTGCATGCTCCAAGATCCATTTGTACAACTTCCTCAGCTAGAAAGCCCGTCTTTGCCATTAGTGAAGAGGCCATGCACAGTGTCACTAGTATCAGACAATAACGAAGATGAAGACATTCAAAACAGGTTATCCAACAACAACACAAAGAAAGTCACTGATTGGAGAGCTCTTGACAAGTTCGTAGCCTCTCAACTGAGTCAAGAAGACACGCTTGAAACCAATGGACTCTCAAGCTTTGAACCCCATGATAGCCACGACATGGCACTGCTGCTACTGCAGAGTAGTAGGGATGAAGGGAACAAGCTAAGCCCGTTTCTGAACACAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1014 0.4389 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTSEGWDSSYFFEEASGLSTVVDPIDLISRQSHSFLAQNFMCKQEIEADNLSCMLQDPFVQLPQLESPSLPLVKRPCTVSLVSDNNEDEDIQNRLSNNNTKKVTDWRALDKFVASQLSQEDTLETNGLSSFEPHDSHDMALLLLQSSRDEGNKLSPFLNTSSDCDIGICVFEK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01735 337 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Phac2g01735 337 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Phac2g01735 337 FunFam NAC domain-containing protein 18 162 - -
Phac2g01735 337 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Phac2g01735 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 253 - -
Phac2g01735 337 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01735 Phac-Chr2 19366571 19371041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01735 2 336 NAC Transcription Factor Family AT2G18060 64.674 1.01e-165 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g01735 NAM 5.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01735 - - pvu:PHAVU_002G110900g 686.026