Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01730 ATGATTTCTTCTGTGGCCTTTCAACCGTCTCTTCCCGCCGTAAACTTCTCCGGTAAAGTTCTGGCCTCGCCGTCCTGTCGCGTTAGATCCCGCCCAATAGTTGCCTTTGCCACCGCCACCGCCACTTCAACTGAGGAAGCTCGCTCTTCCTGGACGGAGAAACCACGCCCTTCCTATCTCAACTCCTCTTGCTCTTCTCTCTACGATATCCTCGGCATCCCCGCCGGTGCCTCCAGCCAGGAAATAAAGGCCGCGTACCGGCGACTGGCCAGAGTCTGCCACCCGGACGTGGCGGCGATCGACCGGAAAAACTCCTCCGCGGACGAATTTATGAAGATCCACGCCGCCTACTCCACTCTCTCGGATCCTGACAAACGCGCCAACTACGACCGGAGCCTGTTCAGGCGACAACGGCCGCTGTCTACTGCGGCGGTGTTCTCGGGCTACACGCGCCGGAACTGGGAAACGGATCAGTGCTGGTAG 483 0.5942 MISSVAFQPSLPAVNFSGKVLASPSCRVRSRPIVAFATATATSTEEARSSWTEKPRPSYLNSSCSSLYDILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01730 160 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Phac2g01730 160 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Phac2g01730 160 CDD DnaJ 68 122 IPR001623 -
Phac2g01730 160 Pfam DnaJ domain 67 130 IPR001623 -
Phac2g01730 160 Gene3D DnaJ domain 57 152 IPR036869 -
Phac2g01730 160 PRINTS DnaJ domain signature 86 101 IPR001623 -
Phac2g01730 160 PRINTS DnaJ domain signature 105 125 IPR001623 -
Phac2g01730 160 PRINTS DnaJ domain signature 68 86 IPR001623 -
Phac2g01730 160 SMART dnaj_3 65 125 IPR001623 -
Phac2g01730 160 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Phac2g01730 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 18 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01730 Phac-Chr2 19164347 19165939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01730 68 130 C2H2 Transcription Factor Family AT1G74250 41.791 5.38e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01730 - - vra:106777082 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01730 2 19164347 19165939 Phac2g01730 2 19164347 19165939 ECH