Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01729 ATGGGGGACATAGTCAAGCAAATATTGGCCAAACCCATCCAGCTGGCGGACCAAGTCACAAAAGCCGCCGACGAGGCCACTTCCTTCAAACAGGAATGTGGCGACCTCAAGTCCAAGACGGAGAAGCTGGCGGCGCTGCTGCGTCAGGCGGCGCGTTCCAGTTCCGAACTCTACGAGCGTCCCACCCGCCGCATCATCCACGAGACCGAACAGGTCCTCGAAAAGGCTCTGGCCCTGGTCCTCAAGTGTCGCGGCAACGCTCTCATGAAGCGCGTGTTCACCCTCAACCCGAGCGCCTCCTTCCGCAAGGTCTCCTCCCACCTTGAAAACTCCGTCGGCGACATCTCCTGGCTCCTCCGCGTCTCGGCCGGGGAAGCTGGCGGCGAGTACCTCGGCGGGCTCCCTCCTATAGCCGCGAACGAGCCGATCCTCTGCCTCATCTGGGAGCAGATCGCCGTCCTTCACACGGGATCCCCGGAGGAGCGGTCGGACGCGGCGGCGTCGCTGGTCTCCTTGGCGAGCGGCAGCCAACGGTACGGGAAGCTGATAATCGAAGAGGGCGGAGTGGGACCCCTGCTGAAGCTTCTGAAGGAAGGGAAAAGCGAAGGGCAAGAGAATGCGGCACGTGCCGTGGGTCTGCTTGGGCGTGACCCTGAGAGCGTGGAGCACATGATCCACGTGGGGGTGTGCTCGGTGCTGGCGAAGATCCTGAAAGAAGGTCCTATGAAAGTGCAAGGTGTGGTGGCATGGGCGGTGTCGGAACTCGCTGCGAATTACCCAAAGTCGCAGGACCTTTTCGCTCAGCACAAGATCGTTACCTTGCTCGTTGGCCACCTCGCTTTCGAAACCGTTGAGGAACACAGTAAGTACGCTATTGTCAGCAAGAAACCCAATTCCATCCACGCCGTCCTCGTCGCCACTACCAACTCCACCAACACTAATCTCCCAAAGGAAAATCACTACCACGACGCCGAACTTCCCACACGCATCCCGCACCCCTTTGCTGAACGACCACGAAATCTCCACAGAGTAATCACCAGCACAATCGCAATGCACGCTGCCACCAAGCAAGGAAACGAAACCAATCCGAATCAGAACAAGAGTAATGGAGTTGGTACTGATGTTAAGCTGGGCAACAACAATCAGAGTCACCAGCGAAACTATTCACATTCGGGGATTAACATGAAAGGAAGGGATCTGGAGGATCCTGGAACTAAGGCTTACATGAAGGAAATGGCAGCGAGGGCTCTCTGGCAATTGGCCAAAGGTAACTCGCCAATTTGCCGTAGCATCACCGAATCACGAGCCTTGTTGTGTTTTGCTGTTCTCCTTGAGAAAGGAACAGAGGCTGTGAAGTACAATTCGGCGATGGCGGTGATGGAGATTACAGCGGTGGCAGAGAAAGATCCGGAATTGAGGAAATCGGCGTTCAAGCCGAACTCTCCCGCTTGCAAAGCCGTGGTTGATCAAGTGGTTAAGATAATTGAGAAGGCGGATTCGGATTCAATCCTTCTGATTCCGTGCATCAAGACGATTGGGAATTTGGCGAGAACGTTCAAGGCCACAGAGACAAGGATGGTTGGGCCGTTGGTGAGGCTTCTGGACGAAAGGGAAGCCGAGGTGACAAGAGAGGCATCGATTGCACTAGCGAAATTCGCTTGCACCGAGAATTACCTGCATGTGGATCACGCCAAGGCAATTATAAGCGCCGGCGGGGCTAAACACTTGATTCAGCTGGTCTATTTTGGAGAAGAGATGGTTCAGATTCCGGCGCTGCTTCTGCTCTCCTACATTGCAATGCACGTCCCCGACAGCGACGAACTTGCTCAGGCTGAAGTCCTCGGAGTCATTGAATGGGCCTCCAAGCAATCCTCCGTTGCCCATAACCAAACACTCGAGGCCCTTTTGCTCGATTCCAAGAGCAGATTGGAGCTTTACCAGTCCAGAGGCCCCAGAGGATCCCATCAACTACATTTACATCACTAG 1986 0.5529 MGDIVKQILAKPIQLADQVTKAADEATSFKQECGDLKSKTEKLAALLRQAARSSSELYERPTRRIIHETEQVLEKALALVLKCRGNALMKRVFTLNPSASFRKVSSHLENSVGDISWLLRVSAGEAGGEYLGGLPPIAANEPILCLIWEQIAVLHTGSPEERSDAAASLVSLASGSQRYGKLIIEEGGVGPLLKLLKEGKSEGQENAARAVGLLGRDPESVEHMIHVGVCSVLAKILKEGPMKVQGVVAWAVSELAANYPKSQDLFAQHKIVTLLVGHLAFETVEEHSKYAIVSKKPNSIHAVLVATTNSTNTNLPKENHYHDAELPTRIPHPFAERPRNLHRVITSTIAMHAATKQGNETNPNQNKSNGVGTDVKLGNNNQSHQRNYSHSGINMKGRDLEDPGTKAYMKEMAARALWQLAKGNSPICRSITESRALLCFAVLLEKGTEAVKYNSAMAVMEITAVAEKDPELRKSAFKPNSPACKAVVDQVVKIIEKADSDSILLIPCIKTIGNLARTFKATETRMVGPLVRLLDEREAEVTREASIALAKFACTENYLHVDHAKAIISAGGAKHLIQLVYFGEEMVQIPALLLLSYIAMHVPDSDELAQAEVLGVIEWASKQSSVAHNQTLEALLLDSKSRLELYQSRGPRGSHQLHLHH* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01729 661 FunFam Armadillo repeat only 4 2 121 - -
Phac2g01729 661 SMART arm_5 217 257 IPR000225 GO:0005515
Phac2g01729 661 SMART arm_5 560 600 IPR000225 GO:0005515
Phac2g01729 661 SMART arm_5 480 517 IPR000225 GO:0005515
Phac2g01729 661 SMART arm_5 176 216 IPR000225 GO:0005515
Phac2g01729 661 SMART arm_5 424 464 IPR000225 GO:0005515
Phac2g01729 661 SUPERFAMILY ARM repeat 152 618 IPR016024 -
Phac2g01729 661 FunFam Armadillo repeat only 2 149 319 - -
Phac2g01729 661 Gene3D - 3 121 IPR036537 GO:0007166
Phac2g01729 661 Gene3D - 381 640 IPR011989 -
Phac2g01729 661 MobiDBLite consensus disorder prediction 378 392 - -
Phac2g01729 661 PANTHER ARMADILLO REPEAT ONLY 4 1 650 - -
Phac2g01729 661 Gene3D - 147 303 IPR011989 -
Phac2g01729 661 MobiDBLite consensus disorder prediction 378 399 - -
Phac2g01729 661 Pfam Armadillo/beta-catenin-like repeat 182 212 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01729 Phac-Chr2 19128239 19130775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01729 - - gmx:100816188 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01729 2 19128239 19130775 Phac2g01729 2 19128239 19130775 ECH
Phac2g01729 2 19128239 19130775 Phac3g04120 3 40440707 40442892 PCT