Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01720 ATGTTTGGCAATGAACTCGGTCTGAATTGGTTTTTGGTTGATGACAAGAACAATAGATTGATTGTGAAGTATAATATGGATTTATATATGCCTAAGTTGACTGGAGGATGGTCTGAAATTCAGGAACATTATGGCCTTCCCGGTGATCACATTTATTTTGATTACGTAGAAAATAATTCTTTTAAGATTACTTTGTTTAAGCGTAGATCAACATCTGCATGTAATCGTGCCCCACTCTTTCATGGTCCCTATGTTCATTTCACTATTATATTATCCCACCATCAATGCAATTCAAGCCACTTGGATCTTCCTGTTGCTTTTGTGAATTACATTCGAGAAAGGAGGTTAAAGTATATTGTCCTTCATGGACATAAGATTGAGGTAAAGTGGGAAATTCTCATAAGGGCACCTTCGAAGCCTTCAGTTAAATTCGGGTGTGGATGGAAAGAGTTTTGTCAGATGCATTCACTTCATGAAGATGACAAGTTGATCTTTGAGGCTAAGAGTGGGGAAACTCCAATTGATATTAAGGTGTTGTTAGTGTTGTAA 549 0.3698 MFGNELGLNWFLVDDKNNRLIVKYNMDLYMPKLTGGWSEIQEHYGLPGDHIYFDYVENNSFKITLFKRRSTSACNRAPLFHGPYVHFTIILSHHQCNSSHLDLPVAFVNYIRERRLKYIVLHGHKIEVKWEILIRAPSKPSVKFGCGWKEFCQMHSLHEDDKLIFEAKSGETPIDIKVLLVL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01720 182 ProSiteProfiles B3 DNA-binding domain profile. 86 182 IPR003340 GO:0003677
Phac2g01720 182 Gene3D - 83 180 IPR015300 -
Phac2g01720 182 Pfam B3 DNA binding domain 88 169 IPR003340 GO:0003677
Phac2g01720 182 CDD B3_DNA 87 166 IPR003340 GO:0003677
Phac2g01720 182 SUPERFAMILY DNA-binding pseudobarrel domain 82 169 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01720 Phac-Chr2 18960332 18960996 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g01720 B3 1.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01720 - - vun:114184752 148.288