Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01701 ATGCACTCTCTTCTCTCCCTCACCTCACCTACCCTCTCATTCTCTCTATCCAACAACCCACATTCTTTTTTGTTTTTGTTCGCTTCTCTTTGTTTCCACTCCATCATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTGCCCCAACTAATGCTGCTCCTCCTTGGAAACCTGATCAAGATCCTATTCATACCAAGTATTCCAACATTTCTTCTACAGGGATCTCTTCTGCATCATCTTCTTCTGTTGAGATGATTACTGTCGGGCAGATGGGGAATTATGGCTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGTGTGGATCCTTATTCCTCAGCCTACGCCAACTTCTTTGATAAAATAAGGCCAAATGAAGAAACCCTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGGGGGTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGCTACTGCAACCTCAAGTCTAATTCATACAACTATGATGGAAACGGGTGGTATCATTCTGAAGACGGGTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTGAACTCCTACACTCGCAGATCTCCAGATTTCGCTTAA 963 0.4538 MHSLLSLTSPTLSFSLSNNPHSFLFLFASLCFHSIMEPQQPQGSQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPAPTNAAPPWKPDQDPIHTKYSNISSTGISSASSSSVEMITVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSAYANFFDKIRPNEETLEEEEEEEEEEEDGGAEIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHSEDGFKNGSRASLELSLNSYTRRSPDFA* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01701 320 CDD homeodomain 64 126 IPR001356 GO:0003677
Phac2g01701 320 ProSiteProfiles 'Homeobox' domain profile. 59 125 IPR001356 GO:0003677
Phac2g01701 320 SUPERFAMILY Homeodomain-like 57 131 IPR009057 -
Phac2g01701 320 MobiDBLite consensus disorder prediction 123 151 - -
Phac2g01701 320 MobiDBLite consensus disorder prediction 38 66 - -
Phac2g01701 320 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 43 315 IPR044555 GO:0003700|GO:0099402
Phac2g01701 320 SMART HOX_1 61 129 IPR001356 GO:0003677
Phac2g01701 320 Gene3D - 58 124 - -
Phac2g01701 320 Pfam Homeodomain 63 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01701 Phac-Chr2 18619593 18621229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01701 57 271 Wox Gene Family AT2G17950 46.457 1.55e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac2g01701 Homeodomain 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01701 - - vra:106776674 528.865