Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01693 ATGTCTGCCGTTAACGAAGAAGCTCCTGCTCCCGCTGCGGAAAAGTCACTGGAGGAGGTGAAGGCGGCCAAGGAGAAAAAACCTAAGGATCCTAAAGAGAAGAAGACGAAACAGGCAAAAACTGCTTCACATCCTCCATATTTTCAGATGATTAAGGAGGCTTTGGTGGCGCTGAATGAGAAGGGAGGATCGAGCCCATATGCCATAGCGAAGTACATGGAAGAGAAGCACAAGGCGGTGCTCCCGGCGAATTTTAAGAAGATTTTAGGTCTGCAATTGAAAAACCAAGCCACTAGAGGAAATCTCGTGAAGATCAAGGCATCGTACAAGCTTTCTGAAACCACAAAGAAAGATAAGATGGAGAAGGTGGAGACTAAGGTGAAGGCTGAGAAAAAAGAATCACGTCCGAAACGTGACAGTAGCGCAACCACCGCTGCGCCGAAGAGCAAGAAGACAACCGAGGCGGTTAAAAAGGCCGGGAAGAAGGTTGGGCCGAAGAAGAGTAAGAAGGTATCAACTCCTGCGAAGCCTAAACAGCCCAGATCCATTAGGTCTCCTTCCAAGAGGACCCGGAAGGCTGCTGCGGCCTGA 591 0.4941 MSAVNEEAPAPAAEKSLEEVKAAKEKKPKDPKEKKTKQAKTASHPPYFQMIKEALVALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQATRGNLVKIKASYKLSETTKKDKMEKVETKVKAEKKESRPKRDSSATTAAPKSKKTTEAVKKAGKKVGPKKSKKVSTPAKPKQPRSIRSPSKRTRKAAAA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01693 196 MobiDBLite consensus disorder prediction 12 40 - -
Phac2g01693 196 MobiDBLite consensus disorder prediction 182 196 - -
Phac2g01693 196 FunFam Histone H1 39 134 - -
Phac2g01693 196 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 43 113 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g01693 196 MobiDBLite consensus disorder prediction 1 46 - -
Phac2g01693 196 Gene3D - 38 135 IPR036388 -
Phac2g01693 196 PRINTS Histone H5 signature 30 51 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac2g01693 196 PRINTS Histone H5 signature 57 74 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac2g01693 196 PRINTS Histone H5 signature 169 186 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac2g01693 196 PRINTS Histone H5 signature 131 145 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac2g01693 196 SMART h15plus2 41 108 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g01693 196 SUPERFAMILY "Winged helix" DNA-binding domain 40 119 IPR036390 -
Phac2g01693 196 MobiDBLite consensus disorder prediction 114 139 - -
Phac2g01693 196 PANTHER HISTONE H1 18 181 - -
Phac2g01693 196 CDD H15 41 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g01693 196 Pfam linker histone H1 and H5 family 44 110 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g01693 196 MobiDBLite consensus disorder prediction 114 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01693 Phac-Chr2 18405832 18407081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01693 36 115 Single Myb Histone (SMH) Gene Family AT1G49950 32.184 1.61e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01693 K11275 - gmx:100500169 232.646