Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01654 ATGACTCTCAAAGGCTTAGTCTCACTTGTCACCAATTTAATTGGCCTAGCTGAGGGACAAAGGAACAATGATGCCCCTTTACCTTCCTACATGATTCTCCTTCAAAGTAACAACCAGCAACCATCTGAATCTGCAGCAGCAGCAGCAGCATCCAATTTCAACGAAGATTGCTGGTGTTGTGTGTGCTTGTCAAGGTTAAAGGCCAGAGATGAAATTCGTGTTCTTCCTTGCTCTCACAAATTCCATAAGATTTGTGTAAATAGATGGCTTAAGGGTCATCACAAAACCTGTCCACTCTGCCGTTTCTCTTTGGGAGCCGAGGACAAGTCTCATCGTGCTGAAATGTTCACTGAAGAGATGTTGATGTGGTTTTCTTCTTTCCATATAGCTGGTATGTAA 399 0.4311 MTLKGLVSLVTNLIGLAEGQRNNDAPLPSYMILLQSNNQQPSESAAAAAASNFNEDCWCCVCLSRLKARDEIRVLPCSHKFHKICVNRWLKGHHKTCPLCRFSLGAEDKSHRAEMFTEEMLMWFSSFHIAGM* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01654 132 SMART ring_2 59 100 IPR001841 -
Phac2g01654 132 SUPERFAMILY RING/U-box 53 105 - -
Phac2g01654 132 ProSiteProfiles Zinc finger RING-type profile. 59 101 IPR001841 -
Phac2g01654 132 Pfam Ring finger domain 59 101 IPR001841 -
Phac2g01654 132 CDD RING-H2_PA-TM-RING 59 101 - -
Phac2g01654 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 106 IPR013083 -
Phac2g01654 132 PANTHER TARGET OF ERK KINASE MPK-1 40 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01654 Phac-Chr2 16499053 16500560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01654 59 110 C3H Transcription Factor Family AT5G45290 49.057 6.80e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01654 - - gmx:100809233 223.016