Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01653 ATGACTCTCAAAGGCTTAGTCTCACTTGTCACCAATTTAATTGGCCTAGCTGAGGGACAAAGGAACAATGATGCCCCTTTACCTTCCTACATGATTCTCCTTCAAAGTAACAACCAGCAACCATCTGAATCTGCAGCAGCAGCAGCAGCATCCAATTTCAACGAAGATTGCTGGTGTTGTGTGTGCTTGTCAAGGTTAAAGGCCAGAGATGAAATTCGTGTTCTTCCTTGCTCTCACAAATTCCATAAGATTTGTGTAAATAGATGGCTTAAGGGTCATCACAAAACCTGTCCACTCTGCCGTTTCTCTTTGGGAGCCGAGGACAAGTCTCATCGTGCTGAAATGTTCACTGAAGAGATGTTGATGTGGTTTTCTTCTTTCCATATAGCTGATATTCCATTGCATAGTTTTTGGAATATATACCTCATCATACTTTCAACGATTCGCTTTTGA 453 0.4172 MTLKGLVSLVTNLIGLAEGQRNNDAPLPSYMILLQSNNQQPSESAAAAAASNFNEDCWCCVCLSRLKARDEIRVLPCSHKFHKICVNRWLKGHHKTCPLCRFSLGAEDKSHRAEMFTEEMLMWFSSFHIADIPLHSFWNIYLIILSTIRF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01653 150 SMART ring_2 59 100 IPR001841 -
Phac2g01653 150 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 107 IPR013083 -
Phac2g01653 150 ProSiteProfiles Zinc finger RING-type profile. 59 101 IPR001841 -
Phac2g01653 150 Pfam Ring finger domain 59 101 IPR001841 -
Phac2g01653 150 SUPERFAMILY RING/U-box 53 105 - -
Phac2g01653 150 CDD RING-H2_PA-TM-RING 59 101 - -
Phac2g01653 150 PANTHER TARGET OF ERK KINASE MPK-1 40 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01653 Phac-Chr2 16496932 16500560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01653 59 110 C3H Transcription Factor Family AT5G45290 49.057 5.61e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01653 - - gmx:100809233 218.779