Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01629 ATGAATCGAAGGTCAATTCGTTGCTCTGTGATTCGACAAAACAAAACCCTTACCCTTCGTTGTCTCATTCGTGACTCTTCATCATCTCCGATCAAGAGCTCTATACTCGGAGATCTTGTTGAAATGGCCGATTCTCCACCAAGAAGGAATTCAAGGTCCCCTTCCCCATGGAGGGCTCAGTCAAGATCGAGGTCAAGGTCTAGATCTAGGCCTAGGTCCCGGTCTAGATCATTTGAAAAACAAAGGCCACGATCCCGCTCAAGAAGTCGTGGAAGATCAAGATCAAGAAGTAATGATAGGACGGAGGCTAAAAATTCAGGGACTACACTTTATGTCACTGGCCTATCTTCAAGGGTCACTGAGAGAGACCTGGAGGAGCATTTCTCTAAGGAGGGAAAGGTTTCTTCTTGTTTTCTTGTGGTGGAGCCTCGCACTCGCATTTCTCGAGGTTTTGCTTTTATTACAATGGATAATGTTGAGGATGCAAACCGCTGCATCAAATATCTCAATCAATCAGTTTTAGAGGGTCGCTATATCACTGTTGAGCGGTCACGAAGGAAGCGTGCAAGAACTCCCACACCTGGACACTATCTTGGCCTGAAAAGTACTAGAGACTATGGATTTCGCGGTGACCGTGGAAGGTATAGAGGAGGTGGATCAGGTCGTGATGATCATGCATATCGTGGAGAGCGTGGAAGATCTCCAAGGCGCTCACCTTATCGAGGTGGTGGTAGAGATTATTCACCGAGGCATTCCCCGCCACCCTATGCTGGAAGAACTAGGAGGGATAGGTCCAGGTCACTTCCATACTCTCCGTATGGTAGCCCAGACAGGAGGTATGCTCGTGGATCTAGGTGA 858 0.479 MNRRSIRCSVIRQNKTLTLRCLIRDSSSSPIKSSILGDLVEMADSPPRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSFEKQRPRSRSRSRGRSRSRSNDRTEAKNSGTTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFITMDNVEDANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGFRGDRGRYRGGGSGRDDHAYRGERGRSPRRSPYRGGGRDYSPRHSPPPYAGRTRRDRSRSLPYSPYGSPDRRYARGSR* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01629 285 MobiDBLite consensus disorder prediction 205 244 - -
Phac2g01629 285 Gene3D - 44 192 IPR012677 -
Phac2g01629 285 SMART rrm1_1 109 182 IPR000504 GO:0003723
Phac2g01629 285 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 44 192 - -
Phac2g01629 285 SUPERFAMILY RNA-binding domain, RBD 102 218 IPR035979 GO:0003676
Phac2g01629 285 MobiDBLite consensus disorder prediction 184 285 - -
Phac2g01629 285 CDD RRM_SF 110 182 - -
Phac2g01629 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 108 186 IPR000504 GO:0003723
Phac2g01629 285 MobiDBLite consensus disorder prediction 37 114 - -
Phac2g01629 285 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 98 274 - -
Phac2g01629 285 MobiDBLite consensus disorder prediction 48 62 - -
Phac2g01629 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 179 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01629 Phac-Chr2 16290999 16293991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01629 104 190 Eukaryotic Initiation Factors Gene Family AT1G49760 33.333 9.61e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01629 K12897 - gmx:100527350 345.895