Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g01628 | ATGAATCGAAGGTCAATTCGTTGCTCTGTGATTCGACAAAACAAAACCCTTACCCTTCGTTGTCTCATTCGTGACTCTTCATCATCTCCGATCAAGAGCTCTATACTCGGAGATCTTGTTGAAATGGCCGATTCTCCACCAAGAAGGAATTCAAGGTCCCCTTCCCCATGGAGGGCTCAGTCAAGATCGAGGTCAAGGTCTAGATCTAGGCCTAGGTCCCGGTCTAGATCATTTGAAAAACAAAGGCCACGATCCCGCTCAAGAAGTCGTGGAAGATCAAGATCAAGAAGTAATGATAGGACGGAGGCTAAAAATTCAGGGACTACACTTTATGTCACTGGCCTATCTTCAAGGGTCACTGAGAGAGACCTGGAGGAGCATTTCTCTAAGGAGGGAAAGGTTTCTTCTTGTTTTCTTGTGGTGGAGCCTCGCACTCGCATTTCTCGAGGTTTTGCTTTTATTACAATGGATAATGTTGAGGATGCAAACCGCTGCATCAAATATCTCAATCAATCAGTTTTAGAGGGTCGCTATATCACTGTTGAGCGGAATACATTGCTTCAGCTATTTTGGCAGCAATCAAAGATGATCAGTTCATCCATGTCAACTTTAGTGATACAGCTTGATCAATGGCAAGCTTAA | 642 | 0.4408 | MNRRSIRCSVIRQNKTLTLRCLIRDSSSSPIKSSILGDLVEMADSPPRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSFEKQRPRSRSRSRGRSRSRSNDRTEAKNSGTTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFITMDNVEDANRCIKYLNQSVLEGRYITVERNTLLQLFWQQSKMISSSMSTLVIQLDQWQA* | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g01628 | 213 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 108 | 186 | IPR000504 | GO:0003723 | |
Phac2g01628 | 213 | SMART | rrm1_1 | 109 | 182 | IPR000504 | GO:0003723 | |
Phac2g01628 | 213 | FunFam | RNA-binding (RRM/RBD/RNP motifs) family protein | 44 | 189 | - | - | |
Phac2g01628 | 213 | Gene3D | - | 43 | 185 | IPR012677 | - | |
Phac2g01628 | 213 | CDD | RRM_SF | 110 | 182 | - | - | |
Phac2g01628 | 213 | SUPERFAMILY | RNA-binding domain, RBD | 59 | 183 | IPR035979 | GO:0003676 | |
Phac2g01628 | 213 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 110 | 179 | IPR000504 | GO:0003723 | |
Phac2g01628 | 213 | MobiDBLite | consensus disorder prediction | 48 | 62 | - | - | |
Phac2g01628 | 213 | MobiDBLite | consensus disorder prediction | 37 | 112 | - | - | |
Phac2g01628 | 213 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 98 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g01628 | Phac-Chr2 | 16290999 | 16293991 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g01628 | 78 | 181 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.846 | 1.33e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g01628 | K12897 | - | gmx:100527350 | 201.06 |