Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01616 ATGACACAGCAGCAAATGGTAGCACAGGTCACAGCCCACACTAATCTGCAAATCCAAGCTGAACATGCTACCTCATTGACACAGATTCCTACAACTATTTCCACCATTGTACCGCAGCTGATATCACTACCACCACCATCAATGTCAGCTTATGGGGTAACAAAATCTTTTGGGTTTTTTCACTCTCAACAGAAATTGCACTCTCCTTCTATCATTGTTGATAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACCTGTAAAGGGTAGTAACTTCTCTCGAAGTTACTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAGCTTGAGCTAACTCTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACGTAAGACCACAAAAGGCACCCTAACCTCAACTGAGAATTCAGATAGGTTGAAAGAAGAGATGAGTTCTCACTCGATGTCCCAAGTGGATCTAGAATCTAGTCAGGTTGAACATGGGTCTGGAACAAGTGACAGTGAGGAAGTAGGTTATTATGAAACTGAAGTGGATGAGAAAAATGATGAACCTGATCCCAAGAGGAGAAACACAAAAGCCAAACTCCAGGATCCAGCTTCTTTAAATTTGCATAGAACTGTGGCAGAGTCTAAGATCATTGTGCAAACAACAAGTGAAGTGGATCTTTTGGATGATGGATATAGATGGCGCAAATATGGACAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAACGGATCCTAAAGCTGTAATAACAACATATGAAGGAAAACATAATCATGATGTACCAACAGCTAAGACTAATAGTCACACACTTGCCAACAATACTGCATCACAACTAAAACCAAAAAATGTCACCGATGAGAAGCATGGTTTCAGCAGCAAGGGTGTTGGGGGCAATGAGCAGCGACCTGTGGCAAGTCTAACATTAAAGCAAGAGTAG 1038 0.4191 MTQQQMVAQVTAHTNLQIQAEHATSLTQIPTTISTIVPQLISLPPPSMSAYGVTKSFGFFHSQQKLHSPSIIVDKPNDDGYNWRKYGQKPVKGSNFSRSYYKCTHPNCPVKKKLELTLEGHVTAIIYKGEHNHQRKTTKGTLTSTENSDRLKEEMSSHSMSQVDLESSQVEHGSGTSDSEEVGYYETEVDEKNDEPDPKRRNTKAKLQDPASLNLHRTVAESKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPTAKTNSHTLANNTASQLKPKNVTDEKHGFSSKGVGGNEQRPVASLTLKQE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01616 345 SUPERFAMILY WRKY DNA-binding domain 227 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 312 IPR044810 GO:0003700
Phac2g01616 345 MobiDBLite consensus disorder prediction 291 345 - -
Phac2g01616 345 MobiDBLite consensus disorder prediction 297 314 - -
Phac2g01616 345 SMART WRKY_cls 235 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 SMART WRKY_cls 77 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 Gene3D WRKY domain 219 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 Gene3D WRKY domain 68 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 MobiDBLite consensus disorder prediction 192 206 - -
Phac2g01616 345 MobiDBLite consensus disorder prediction 129 210 - -
Phac2g01616 345 ProSiteProfiles WRKY domain profile. 77 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 MobiDBLite consensus disorder prediction 160 176 - -
Phac2g01616 345 FunFam WRKY transcription factor 33 222 288 - -
Phac2g01616 345 ProSiteProfiles WRKY domain profile. 230 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 FunFam WRKY transcription factor 63 137 - -
Phac2g01616 345 SUPERFAMILY WRKY DNA-binding domain 75 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 Pfam WRKY DNA -binding domain 236 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01616 345 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01616 Phac-Chr2 16149765 16151917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01616 1 345 WRKY Transcription Factor Family AT2G03340 53.476 2.30e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g01616 WRKY 7.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01616 - - vun:114179749 510.76