Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01615 ATGCTTGGCGGTGGAAATGGAGATGGAGAGGAAGCACCACCCTCCACGGCCGCGCGTTCCAGAAGTGATCTCCGACCACGCGCTTCCACGGAGAGCGTTTTCAACTGTGGAGACACGGCAGGGTATAGCCCCGGTCCCATGACTCTGTTTTCTAGCTTGTTCGGCGATGGTGATGGCGACGAGTATAAGTCGTTCTCGGAGTTCCTTGCCGGCGCCATGGTGGACCCCATTCCTCTTCGGTCTTTTCCAGATTCAGCTTCTCAAGGACAATTTGGAATGACACAGCAGCAAATGGTAGCACAGGTCACAGCCCACACTAATCTGCAAATCCAAGCTGAACATGCTACCTCATTGACACAGATTCCTACAACTATTTCCACCATTGTACCGCAGCTGATATCACTACCACCACCATCAATGTCAGCTTATGGGGTAACAAAATCTTTTGGGTTTTTTCACTCTCAACAGAAATTGCACTCTCCTTCTATCATTGTTGATAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACCTGTAAAGGGTAGTAACTTCTCTCGAAGTTACTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAGCTTGAGCTAACTCTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACGTAAGACCACAAAAGGCACCCTAACCTCAACTGAGAATTCAGATAGGTTGAAAGAAGAGATGAGTTCTCACTCGATGTCCCAAGTGGATCTAGAATCTAGTCAGGTTGAACATGGGTCTGGAACAAGTGACAGTGAGGAAGTAGGTTATTATGAAACTGAAGTGGATGAGAAAAATGATGAACCTGATCCCAAGAGGAGAAACACAAAAGCCAAACTCCAGGATCCAGCTTCTTTAAATTTGCATAGAACTGTGGCAGAGTCTAAGATCATTGTGCAAACAACAAGTGAAGTGGATCTTTTGGATGATGGATATAGATGGCGCAAATATGGACAGAAAGTTGTCAAAGGCAACCCATATCCAAGGTGA 1047 0.4537 MLGGGNGDGEEAPPSTAARSRSDLRPRASTESVFNCGDTAGYSPGPMTLFSSLFGDGDGDEYKSFSEFLAGAMVDPIPLRSFPDSASQGQFGMTQQQMVAQVTAHTNLQIQAEHATSLTQIPTTISTIVPQLISLPPPSMSAYGVTKSFGFFHSQQKLHSPSIIVDKPNDDGYNWRKYGQKPVKGSNFSRSYYKCTHPNCPVKKKLELTLEGHVTAIIYKGEHNHQRKTTKGTLTSTENSDRLKEEMSSHSMSQVDLESSQVEHGSGTSDSEEVGYYETEVDEKNDEPDPKRRNTKAKLQDPASLNLHRTVAESKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01615 348 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 115 348 IPR044810 GO:0003700
Phac2g01615 348 MobiDBLite consensus disorder prediction 1 37 - -
Phac2g01615 348 MobiDBLite consensus disorder prediction 221 306 - -
Phac2g01615 348 ProSiteProfiles WRKY domain profile. 322 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 FunFam WRKY transcription factor 155 229 - -
Phac2g01615 348 MobiDBLite consensus disorder prediction 252 268 - -
Phac2g01615 348 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 Pfam WRKY DNA -binding domain 328 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 ProSiteProfiles WRKY domain profile. 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 Gene3D WRKY domain 314 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 MobiDBLite consensus disorder prediction 284 298 - -
Phac2g01615 348 SUPERFAMILY WRKY DNA-binding domain 167 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 Gene3D WRKY domain 160 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01615 348 SUPERFAMILY WRKY DNA-binding domain 319 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01615 Phac-Chr2 16148714 16151917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01615 17 69 WRKY Transcription Factor Family AT2G03340 49.057 7.28e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g01615 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01615 - - vun:114179749 485.723