Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01575 ATGTCTTCTCGCAGATCAAATGGAAGAGCTAGTGGTAGAGTTGCATTGGAAAAGGAAGTCCCCTTACCACAGCTGCCTGATCATACAACAAATTTGCAATGGGACGAGGTTAAACCACTTTCAGGAAAACCATACAGTCATAGTATTCTTGCACCTTCAAATCTCTGTCCCCGTTATTATATGTGGCTTGCGTCCAACTTACGGTTAGAACTTCCTTCTTGTGAGGTCCCCACCATACTCACCTATATGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACAGCAGGTTTTAAATGTCGCAGGATGGAAAAAGTTTGCTGTTGAAAATTGTTTGAGGATTGGAGATGCATGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAATAATCTTTGAAGTTCAGATTCTTAGAGGTGACATTCCATCCGAAATTCTTGAAAATGAAATGATCACGGGTCAGAGTCGGGAAATGCCAATTGTCCTTAACTAG 498 0.4177 MSSRRSNGRASGRVALEKEVPLPQLPDHTTNLQWDEVKPLSGKPYSHSILAPSNLCPRYYMWLASNLRLELPSCEVPTILTYMGKSWDMVYCGQNKQQVLNVAGWKKFAVENCLRIGDACIFELMESSDKKIIFEVQILRGDIPSEILENEMITGQSREMPIVLN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01575 165 SMART B3_2 45 142 IPR003340 GO:0003677
Phac2g01575 165 CDD B3_DNA 49 140 IPR003340 GO:0003677
Phac2g01575 165 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 42 144 IPR044837 -
Phac2g01575 165 SUPERFAMILY DNA-binding pseudobarrel domain 75 140 IPR015300 -
Phac2g01575 165 Pfam B3 DNA binding domain 78 135 IPR003340 GO:0003677
Phac2g01575 165 Gene3D - 33 142 IPR015300 -
Phac2g01575 165 ProSiteProfiles B3 DNA-binding domain profile. 84 142 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01575 Phac-Chr2 15563868 15566567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01575 103 142 REM Transcription Factor Family AT4G33280 47.500 6.85e-06 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g01575 B3 1.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01575 - - gmx:100804948 234.958