Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01574 ATGTCTTCTCGCAGATCAAATGGAAGAGTAGCTAGTGGTAGAGTTGCATTGGAAAAGGAAGTCCCCTTACCACAGCTGCCTGATCATACAACAAATTTGCAATGGGACGAGGTTAAACCACTTTCAGGAAAACCATACAGTCATAGTATTCTTGCACCTTCAAATCTCTGTCCCCGTTATTATATGTGGCTTGCGTCCAACTTACGGTTAGAACTTCCTTCTTGTGAGGTCCCCACCATACTCACCTATATGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACAGCAGGTTTTAAATGTCGCAGGATGGAAAAAGTTTGCTGTTGAAAATTGTTTGAGGATTGGAGATGCATGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAATAATCTTTGAAGTTCAGATTCTTAGAGGTGACATTCCATCCGAAATTCTTGAAAATGAAATGATCACGGGTCAGAGTCGGGAAATGCCAATTGTCCTTAACTAG 501 0.4172 MSSRRSNGRVASGRVALEKEVPLPQLPDHTTNLQWDEVKPLSGKPYSHSILAPSNLCPRYYMWLASNLRLELPSCEVPTILTYMGKSWDMVYCGQNKQQVLNVAGWKKFAVENCLRIGDACIFELMESSDKKIIFEVQILRGDIPSEILENEMITGQSREMPIVLN* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01574 166 SMART B3_2 46 143 IPR003340 GO:0003677
Phac2g01574 166 ProSiteProfiles B3 DNA-binding domain profile. 85 143 IPR003340 GO:0003677
Phac2g01574 166 SUPERFAMILY DNA-binding pseudobarrel domain 76 141 IPR015300 -
Phac2g01574 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 145 IPR044837 -
Phac2g01574 166 CDD B3_DNA 50 141 IPR003340 GO:0003677
Phac2g01574 166 Pfam B3 DNA binding domain 79 136 IPR003340 GO:0003677
Phac2g01574 166 Gene3D - 34 143 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01574 Phac-Chr2 15563868 15566567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01574 104 143 REM Transcription Factor Family AT4G33280 47.500 6.66e-06 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g01574 B3 1.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01574 - - gmx:100804948 242.276