Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01570 ATGAAAGATGGTGGTAGGAAGCAGGGTGCACCCTCACCCTGTGCTGCATGCAAGCTCCTTCGGAGAAGATGTGCTCAAGATTGTGTTTTTGCTCCTTATTTTCCTGCTGATGAACCCCACAAGTTTGCAAATGTCCACAGAGTCTTTGGTGCCAGCAATATCAACAAGATGCTTCAGGAGTTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTGTATGGGTGTGTGGGGGCCATTTCATCTCTTCAGCAACAGATTGATGTGTTGCAGACCCAATTGGCAGTGGCTCAAGCTGAAGCTGTGCACCTGAGAGTGCGCCAGAGTGCATCCCTCTACAGCCCCACCAGCCCTACCAACAGTGCCTCTCCATCATCCAAGATCATTCACTCACAACCCAAACCTATTTTTGACATCGACATGGACATGGTGGTGGACCAGACCACCTATAGTGATTCAATGTGGTGA 504 0.5 MKDGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNINKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQSASLYSPTSPTNSASPSSKIIHSQPKPIFDIDMDMVVDQTTYSDSMW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01570 167 Coils Coil 92 112 - -
Phac2g01570 167 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Phac2g01570 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 135 - -
Phac2g01570 167 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01570 Phac-Chr2 15482798 15487072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01570 1 167 AS2 family AT1G31320 70.349 4.07e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac2g01570 LOB 6.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01570 - - vum:124847068 306.605