Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01550 ATGGAAGGGAATGCGAAAAGCGACCAAATCGTGGATGTAGGATCGGTAGTGGAGGCCGTTTCAGCCGATGACGGTGATGCTCCTCTCTACAGCCTCGAAAGTCTTTGCATGCGATGTGGTGAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCCCACTTCAGAAAGATTTTGTTATCAGCTTTTGAATGTCCACATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTTGTTACACTTTGAAGATTCCATCAGGCGAGCAAAAGATGCTAAATCGTCAAGTGGTTAAATCGGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAACGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAACGGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCGGAGACAGCTGAAGCAATTGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCATGCATCACATTTATTCTTGATGATCCTGCCGGAAACAGCTTTATTGAAAACCCGTTTGCACCATCATCTGATCCATCGTTGACGATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCTGCACAGACTGAAAGAACTCATGTTGATGCCCCGGGAGGGGGAGAAGCTGTGACTACTGATCAAGTGAGGAGAGAACCACATGGATCAATAGGGGCAACAGCTGGCCATCGAGCCATTGCACAGAGTAACAGTGCAGAAATTGCTGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCTTCTACTTGTGGTGCCTGTGCTGCTAGTTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATGCCTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAATAATTACTCTTTCTGTGAAGAATGTCAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAAGTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATTACAAGAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAACCAATTAGCTTGTAAGTTTTCCAACTCAGACATCAAGCTATACTTTGAGCAGATAAAGTTCACATTTTCTGAGTTGAAATTCTGA 1461 0.4326 MEGNAKSDQIVDVGSVVEAVSADDGDAPLYSLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYTLKIPSGEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRATDELQALQEERKKVAPETAEAIDQFLVKLRACATGESCITFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSAQTERTHVDAPGGGEAVTTDQVRREPHGSIGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAASCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKLLSLEEAWTLILDDALANSFVAPATDDLKEDNQLACKFSNSDIKLYFEQIKFTFSELKF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01550 486 SMART zpr1 290 450 IPR004457 GO:0008270
Phac2g01550 486 SMART zpr1 34 194 IPR004457 GO:0008270
Phac2g01550 486 FunFam Zinc finger protein zpr1 336 471 - -
Phac2g01550 486 Pfam ZPR1 zinc-finger domain 290 448 IPR004457 GO:0008270
Phac2g01550 486 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Phac2g01550 486 FunFam Zinc finger protein ZPR1 24 79 - -
Phac2g01550 486 Gene3D ZPR1, A/B domain 336 470 IPR042451 -
Phac2g01550 486 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Phac2g01550 486 PANTHER ZINC FINGER PROTEIN ZPR1 16 462 IPR040141 -
Phac2g01550 486 FunFam zinc finger protein ZPR1 80 221 - -
Phac2g01550 486 NCBIfam ZPR1 zinc finger domain 291 450 IPR004457 GO:0008270
Phac2g01550 486 NCBIfam ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Phac2g01550 486 Gene3D ZPR1, zinc finger domain 280 335 IPR042452 -
Phac2g01550 486 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Phac2g01550 486 FunFam Zinc finger protein ZPR1 281 335 - -
Phac2g01550 486 Coils Coil 130 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01550 Phac-Chr2 15037875 15052118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01550 6 461 C2H2 Transcription Factor Family AT5G22480 75.274 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01550 K06874 - gmx:100798741 832.787