Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01518 ATGACATTGATTTCAATGGAGAACATTCTGGGTCTTATCAAACTTCGTATCAAAAGAGCCTCTAATCTCAAAGCTTGCGATACTCGTACCAGTGACCCTTATGTCTTTGTCACCATGGCCGAACAGCAACTGAAAACTACAGTTGTGAAAGATACCTGTAATCCTGAGTGGAATGAAGAACTGACACTTTATGTAACAGATGTTAACATTCCGATACTTCTGACAGTTACAGACAAAGACACTTTCACGGTAGATGACAACATGGGCGATGCAGAAATAGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAACGATCTCCCAGAGGGTCATATAGTCAAGAAGGTTCAACGAGATAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATATGGAAAAATGATAAACTCATCCAAGAGATGACTTTAAGATTGAGAAACGTCAAGAGTGGGGAAATAACTGTGGAAATTGGGTGGGTTACTCTTCCAGATTCAAAAGGCTTATCACAAGTTGAGTTGTAG 528 0.4072 MTLISMENILGLIKLRIKRASNLKACDTRTSDPYVFVTMAEQQLKTTVVKDTCNPEWNEELTLYVTDVNIPILLTVTDKDTFTVDDNMGDAEIDLKPYLQCVKMELNDLPEGHIVKKVQRDRTNCLAEESSCIWKNDKLIQEMTLRLRNVKSGEITVEIGWVTLPDSKGLSQVEL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01518 175 Gene3D C2 domain 10 172 IPR035892 -
Phac2g01518 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 168 IPR044562 -
Phac2g01518 175 SMART C2_3c 12 107 IPR000008 -
Phac2g01518 175 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Phac2g01518 175 Pfam C2 domain 12 97 IPR000008 -
Phac2g01518 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 105 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01518 Phac-Chr2 14063999 14066737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01518 43 172 C2H2 Transcription Factor Family AT1G70790 53.788 1.22e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01518 - - pvu:PHAVU_002G096400g 338.576