Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01492 ATGATGGACTTAGCAACCCAGAAGTCCCACATCTTCAAAAACCATTTCCTTTTCTTCCTCTTCTTCTCTTTCTTTCAGTTCCCACTCTTTTCATCACAATCAAGCGATTCATTCCCCAAAGAAGCCTACCCCAGCAGGTCTGGTTACCTTCCAGTCAACCCTAGTTCTGCTTCTGCAATTTTCTACGCCTTCTATGAAGCCCAAAACTCCACTCTGCATCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGCCAACTTCTATGAGCTTGGACCCTGGCGAGTCACCCCATCCCTCACCCTTCAACGCAACCCTGCTTCTTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAATCCCATTGGATCTGGCTTCAGTGTGGCCTCAACCCCACAAGAGATCCCTAAAGATCAAAACGCCGTTGCCAAACACCTCTTCGCTGCTATAACCAACTTTCTTCAACTGGATCCTCTTTTCAAGCATCGCCCTATTTATATTACTGGAGAAAGCTACGCTGGGAAGTATGTGCCTGCAATTGGGTACTATATATTGAAGAAAAATGAAAAGTTGGAGGCTTCCGAAAGAGTGAATCTGGGTGGTGTAGCTATTGGGGATGGGTTAACTGACCCCGAAACTCAAGTTGCGTCTCATGCAGTGAATGCTTACTATGCTGGATTGATCAATGAGAGGCAGAAGAAAGAGTTGGAAAAAGTTCAATCGGAAGCAGTTGCGTTGACCCAAATGAGGAATTGGAGTGAAGCAACAGATGCGAGAAGCAGGGTGTTGGGGATGTTGCGGGAGATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAGAGGCCGTACGAGGATGATTTGGTGGAACGATTGTTGAACATAGGGGAGGTGAAGAAGGCCCTTGGGGTGAATGAATCGTTTGTGTATGAGATATGTAGTGATGTTGTTGGGGAGGCATTGCATGGTGATGTGATGAAAAGTGTGAAAGATATGGTGGAATACTTGGTGAGGAGGAGCAGGGTGTTGTTGTATGAAGGTGAGTATGATTTGAGGGATGGTGTGGTCCAAACAGAGGTGTGGGTGAAGACAATGAAATGGGAAGGGATAGACAAGTTTCTGAATGCTGAAAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTACAGAATTGGAAGTCTCTCACCAATGTTGTCGTTTTGGGAGCTGGCCATCTTCTGCCCACAGACCAGCCTCTTAACTCTCAAACTATGATAGAAGATTGGGTTCTCCAAAAGGGTTTCTTTTTTAAAGCGTGTAGCAGGAAAATGCATAAAGAAATTCCACTTAGTTAA 1365 0.4557 MMDLATQKSHIFKNHFLFFLFFSFFQFPLFSSQSSDSFPKEAYPSRSGYLPVNPSSASAIFYAFYEAQNSTLHLSQTPLLIWLQGGPGCSSMLANFYELGPWRVTPSLTLQRNPASWNRIFGLLFLDNPIGSGFSVASTPQEIPKDQNAVAKHLFAAITNFLQLDPLFKHRPIYITGESYAGKYVPAIGYYILKKNEKLEASERVNLGGVAIGDGLTDPETQVASHAVNAYYAGLINERQKKELEKVQSEAVALTQMRNWSEATDARSRVLGMLREMTGLATLYDYTRKRPYEDDLVERLLNIGEVKKALGVNESFVYEICSDVVGEALHGDVMKSVKDMVEYLVRRSRVLLYEGEYDLRDGVVQTEVWVKTMKWEGIDKFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPLNSQTMIEDWVLQKGFFFKACSRKMHKEIPLS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01492 454 SUPERFAMILY alpha/beta-Hydrolases 42 435 IPR029058 -
Phac2g01492 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 FunFam Carboxypeptidase 30 440 - -
Phac2g01492 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 422 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Phac2g01492 454 Gene3D alpha/beta hydrolase 29 442 IPR029058 -
Phac2g01492 454 Pfam Serine carboxypeptidase 44 433 IPR001563 GO:0004185|GO:0006508
Phac2g01492 454 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01492 Phac-Chr2 13621338 13622702 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01492 294 433 Calmodulin-binding Proteins AT2G22960 23.077 1.43e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01492 K09645 - gmx:100780822 701.434