Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01430 ATGGCGGGCGGCGGAAGTGGGAACCGGCCGCCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGTGGCTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGACTGATGGGGATGACTGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGCCGCCGTGCACGACTCATCTGGCTTCTTTTCACCTTCTCAGGTGTCATTTGAAATGACACACCAGCAGGCCATAGCCCAAGTTTCAGTGCAGGCTTCACAAGCTAACTCAAACATGAATATCCACCCTGAACATTCATTGTCTGTATCAGTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAATACTAAACAACAGCTCATTCCACCCTTAACTGCAGACTCTCGGGCCACAATGACCGAATTCGCTCATCATTCTCACTCTGAACAAAAATTGCAATCTTCAGCACTGAATGTTGATAAGCCTGCAGATGATGGCCACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACACATCCACACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCTTCCTAACAAGCGCTCAAAAGATGCTGTGACTTCAAATGAAAATTCAAATATGCATTGGAATGCTTCTGCTTATCAAGGGACTACTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGATCATGAAGCTGAAGAGGATGAGAAAAATGTTGAGCCTCACCCCAAGAGGAGTAAAACAGAAGTCACAAATTTAGATCCAACATTTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTAGTCAAAGGCAACCCTTATCCGAGGAGTTATTACAAATGTACAACCCCAGGTTGTAAGGTCCGAAAGCATGTTGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATACGAAGGAAAACACAATCATGATGTTCCAGCAGCTAAGACCAGCAGCCACGTTATGGCTGGTAACACTTCACAGATAAAACCACAGAACTCCAATCCTGGAAAACATAGTTTTGGCACCAGAGATATTGGTGGCAATGAACAACAGCCGGTTGCACGGCTTCGGTTGAAGGAAGAGAAGATAACCTAG 1365 0.4652 MAGGGSGNRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDCNKSFSQLLAGAMASPVAAAVHDSSGFFSPSQVSFEMTHQQAIAQVSVQASQANSNMNIHPEHSLSVSVSSPTSFTQVPAATSNTKQQLIPPLTADSRATMTEFAHHSHSEQKLQSSALNVDKPADDGHNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPLPNKRSKDAVTSNENSNMHWNASAYQGTTKMDPESSQATADHLSGSDSEEVGDHEAEEDEKNVEPHPKRSKTEVTNLDPTFSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHVMAGNTSQIKPQNSNPGKHSFGTRDIGGNEQQPVARLRLKEEKIT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01430 454 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 MobiDBLite consensus disorder prediction 231 253 - -
Phac2g01430 454 MobiDBLite consensus disorder prediction 267 284 - -
Phac2g01430 454 FunFam WRKY transcription factor 33 329 395 - -
Phac2g01430 454 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 423 IPR044810 GO:0003700
Phac2g01430 454 MobiDBLite consensus disorder prediction 267 314 - -
Phac2g01430 454 SMART WRKY_cls 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 MobiDBLite consensus disorder prediction 298 313 - -
Phac2g01430 454 MobiDBLite consensus disorder prediction 1 24 - -
Phac2g01430 454 SUPERFAMILY WRKY DNA-binding domain 179 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 FunFam WRKY transcription factor 151 241 - -
Phac2g01430 454 ProSiteProfiles WRKY domain profile. 182 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 MobiDBLite consensus disorder prediction 416 454 - -
Phac2g01430 454 Gene3D WRKY domain 166 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01430 454 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01430 Phac-Chr2 12464402 12469149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01430 19 65 WRKY Transcription Factor Family AT2G03340 63.265 3.89e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g01430 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01430 - - gmx:100127369 702.205