Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g01430 | ATGGCGGGCGGCGGAAGTGGGAACCGGCCGCCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGTGGCTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGACTGATGGGGATGACTGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGCCGCCGTGCACGACTCATCTGGCTTCTTTTCACCTTCTCAGGTGTCATTTGAAATGACACACCAGCAGGCCATAGCCCAAGTTTCAGTGCAGGCTTCACAAGCTAACTCAAACATGAATATCCACCCTGAACATTCATTGTCTGTATCAGTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAATACTAAACAACAGCTCATTCCACCCTTAACTGCAGACTCTCGGGCCACAATGACCGAATTCGCTCATCATTCTCACTCTGAACAAAAATTGCAATCTTCAGCACTGAATGTTGATAAGCCTGCAGATGATGGCCACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACACATCCACACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCTTCCTAACAAGCGCTCAAAAGATGCTGTGACTTCAAATGAAAATTCAAATATGCATTGGAATGCTTCTGCTTATCAAGGGACTACTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGATCATGAAGCTGAAGAGGATGAGAAAAATGTTGAGCCTCACCCCAAGAGGAGTAAAACAGAAGTCACAAATTTAGATCCAACATTTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTAGTCAAAGGCAACCCTTATCCGAGGAGTTATTACAAATGTACAACCCCAGGTTGTAAGGTCCGAAAGCATGTTGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATACGAAGGAAAACACAATCATGATGTTCCAGCAGCTAAGACCAGCAGCCACGTTATGGCTGGTAACACTTCACAGATAAAACCACAGAACTCCAATCCTGGAAAACATAGTTTTGGCACCAGAGATATTGGTGGCAATGAACAACAGCCGGTTGCACGGCTTCGGTTGAAGGAAGAGAAGATAACCTAG | 1365 | 0.4652 | MAGGGSGNRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDCNKSFSQLLAGAMASPVAAAVHDSSGFFSPSQVSFEMTHQQAIAQVSVQASQANSNMNIHPEHSLSVSVSSPTSFTQVPAATSNTKQQLIPPLTADSRATMTEFAHHSHSEQKLQSSALNVDKPADDGHNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPLPNKRSKDAVTSNENSNMHWNASAYQGTTKMDPESSQATADHLSGSDSEEVGDHEAEEDEKNVEPHPKRSKTEVTNLDPTFSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHVMAGNTSQIKPQNSNPGKHSFGTRDIGGNEQQPVARLRLKEEKIT* | 455 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g01430 | 454 | ProSiteProfiles | WRKY domain profile. | 337 | 402 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | SUPERFAMILY | WRKY DNA-binding domain | 334 | 402 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 231 | 253 | - | - | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 267 | 284 | - | - | |
Phac2g01430 | 454 | FunFam | WRKY transcription factor 33 | 329 | 395 | - | - | |
Phac2g01430 | 454 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 85 | 423 | IPR044810 | GO:0003700 | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 267 | 314 | - | - | |
Phac2g01430 | 454 | SMART | WRKY_cls | 181 | 239 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | SMART | WRKY_cls | 342 | 401 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 298 | 313 | - | - | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Phac2g01430 | 454 | SUPERFAMILY | WRKY DNA-binding domain | 179 | 240 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | FunFam | WRKY transcription factor | 151 | 241 | - | - | |
Phac2g01430 | 454 | ProSiteProfiles | WRKY domain profile. | 182 | 240 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | MobiDBLite | consensus disorder prediction | 416 | 454 | - | - | |
Phac2g01430 | 454 | Gene3D | WRKY domain | 166 | 241 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | Gene3D | WRKY domain | 327 | 403 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | Pfam | WRKY DNA -binding domain | 343 | 399 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac2g01430 | 454 | Pfam | WRKY DNA -binding domain | 182 | 238 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g01430 | Phac-Chr2 | 12464402 | 12469149 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g01430 | 19 | 65 | WRKY Transcription Factor Family | AT2G03340 | 63.265 | 3.89e-09 | 56.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac2g01430 | WRKY | 1.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g01430 | - | - | gmx:100127369 | 702.205 |