Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01393 ATGGGTGCTGGTGACTACTACAAGATACTGAAGGTGAAACGTGATGCCACTAATGAAGAGGTGAAGAGGGCTTATAGGAGTTTGGCCATGAAATGGCACCCGGATAAAAACCTTGAAGACCCGCTTAGGAAGGAAGAGTTTGAAAACAAGTTCAAGCAAGTTGCTGAGGCCTATGATGTGCTCAGTGACCCCAAGAAGCGCCAGATCTATGATCTATACGGTCACTATCCCCTTAACTCTCAACGCTTCAGCAAAGAACATGGTAATGGGATTATGAAGGAAGCAGGGGGGGTTGAAAGCAGCTTGACTTGTACCCTTGTGGAGCTTTACAATGGATGCAAAAAGAAGTTGAAGGTCTCAAGGACTGTTCCTGATGAATTCGGAGTGTCAAAGTCTGTAGAAGAAATCTTGAAGATAAATATTAAACCTGGTTGGAAGAAGGGTACAAAAATCACTTTTCCTGGAAAAGGCAACCAAGAACCAGGTGGTGCTCCAACTGATCTAATTTTTGTGTTGGATGAGAGACCTCATGATATTTTCAAGAGGGATGGAAATGATCTTGTAGTGATCCAGAAGATATCACTTGTAGAGGCTCTAACAGGAAAGACTTTTAACTTGACTACATTGGATGGAAGAGATCTCACAATCCAAGTGACTGATATTGTGAGACCAGGCTTTGAGCTAGTGGTCTCAAATGAAGGTATGCCCATCTCAAAGGAACCTGGCAAGAAAGGAAACCTCAGAATCAAGTTTGATGTTGTGTTTCCATCAAGACTGACCACACAACAAAAATCTGATCTAAGAAGGATTCTCCTTAGTGTTGTTGATTACTAA 834 0.4221 MGAGDYYKILKVKRDATNEEVKRAYRSLAMKWHPDKNLEDPLRKEEFENKFKQVAEAYDVLSDPKKRQIYDLYGHYPLNSQRFSKEHGNGIMKEAGGVESSLTCTLVELYNGCKKKLKVSRTVPDEFGVSKSVEEILKINIKPGWKKGTKITFPGKGNQEPGGAPTDLIFVLDERPHDIFKRDGNDLVVIQKISLVEALTGKTFNLTTLDGRDLTIQVTDIVRPGFELVVSNEGMPISKEPGKKGNLRIKFDVVFPSRLTTQQKSDLRRILLSVVDY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01393 277 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 265 IPR008971 GO:0006457|GO:0051082
Phac2g01393 277 Gene3D - 177 257 - -
Phac2g01393 277 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 271 - -
Phac2g01393 277 CDD DnaJ 5 63 IPR001623 -
Phac2g01393 277 SUPERFAMILY HSP40/DnaJ peptide-binding domain 99 178 IPR008971 GO:0006457|GO:0051082
Phac2g01393 277 FunFam DNAJ heat shock family protein 176 271 - -
Phac2g01393 277 Gene3D DnaJ domain 2 96 IPR036869 -
Phac2g01393 277 CDD DnaJ_C 98 259 - -
Phac2g01393 277 Gene3D - 97 175 - -
Phac2g01393 277 Pfam DnaJ C terminal domain 99 256 IPR002939 -
Phac2g01393 277 SUPERFAMILY Chaperone J-domain 4 83 IPR036869 -
Phac2g01393 277 FunFam Dnaj homolog subfamily b member 94 175 - -
Phac2g01393 277 SMART dnaj_3 4 66 IPR001623 -
Phac2g01393 277 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Phac2g01393 277 Pfam DnaJ domain 5 71 IPR001623 -
Phac2g01393 277 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Phac2g01393 277 PRINTS DnaJ domain signature 7 25 IPR001623 -
Phac2g01393 277 PRINTS DnaJ domain signature 46 66 IPR001623 -
Phac2g01393 277 PRINTS DnaJ domain signature 66 85 IPR001623 -
Phac2g01393 277 PRINTS DnaJ domain signature 25 40 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01393 Phac-Chr2 12002593 12004883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01393 6 73 C2H2 Transcription Factor Family AT1G74250 36.232 3.35e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01393 K09510 - gmx:100778440 474.552