Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01380 ATGGCGGGTGGCAAGCTTCATCCTGGTTCAAACATGTCACTTCTCCTCCAAAACGACAGGCTCCCTTGCTCCTCTGAAGTCCTTGAGTCTCTTTGGGCTCACACCTCTAACGCTGCTTCCTTCCAAGGTTCAAAATCTATGGTTGATTTTGAGAATGTTAGTGGGGGCAGGGTGACGGATAGGCCCTTTTTTCAAGCGTTGGAGAAGGAAGATAACTGTGATGATGATTATGAGGGTTGCTTCCATCAACCGGGTAAGAAAAGGAGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAGGTCGAGAACAAGCTTGAACCTGAAAGGAAGGTCCAACTTGCAAAGGAGCTTGGCTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAAAACCGAAGGGCAAGGTTCAAGACCAAGCAGCTAGAAAAAGATTATGGCACATTGAAAGCTAGTTATGACAGACTCAAAGGTGACTATGAAAGTCTTCTTCAAGAGAATGACAAGTTAAAAGCAGAGGTGAATTCTCTGGAGAGCAAATTGATTCTTAGAGATAAAGAGAAGGAGAATTCGGACGACAAGTCATCTCCTGATGCTGTCAATTCACCCCACAAAGAGCCTATGGATTTAATTTCAAATTCAACATCTGAAAATGGGACCAAAGTGTCACTCCCTATTATGGTAACATGCAAGCAAGAAGATGCCAATTCAGCCAAAAGTGATGTGCTTGATTCGGACAGCCCACATTGCACTGATGGGAACCATCCCTCTTCATTCGTGGAGCCTGCTGATTCCTCCCATGCTTTTGAACCAGACCACTCCGACTTCTCCCAAGATGAAGAGGATAATCTTAGTGAAAGCCTTTTGACTCTCCCTTGCTTACCAAAGGTTGAAGAAGCCTGCTATGATGACCCTCCTGAAAACCCTTGTAATTTTGGCTTCCATGTCGAGGATCAAACCTTCTGTTTCTGGCCCTATTGA 984 0.4512 MAGGKLHPGSNMSLLLQNDRLPCSSEVLESLWAHTSNAASFQGSKSMVDFENVSGGRVTDRPFFQALEKEDNCDDDYEGCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDRLKGDYESLLQENDKLKAEVNSLESKLILRDKEKENSDDKSSPDAVNSPHKEPMDLISNSTSENGTKVSLPIMVTCKQEDANSAKSDVLDSDSPHCTDGNHPSSFVEPADSSHAFEPDHSDFSQDEEDNLSESLLTLPCLPKVEEACYDDPPENPCNFGFHVEDQTFCFWPY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01380 327 PRINTS Lambda-repressor HTH signature 121 137 IPR000047 GO:0003677
Phac2g01380 327 PRINTS Lambda-repressor HTH signature 112 121 IPR000047 GO:0003677
Phac2g01380 327 Pfam Homeodomain 86 139 IPR001356 GO:0003677
Phac2g01380 327 CDD homeodomain 84 142 IPR001356 GO:0003677
Phac2g01380 327 SUPERFAMILY Homeodomain-like 76 143 IPR009057 -
Phac2g01380 327 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Phac2g01380 327 SMART HOX_1 83 145 IPR001356 GO:0003677
Phac2g01380 327 MobiDBLite consensus disorder prediction 183 220 - -
Phac2g01380 327 Gene3D - 80 147 - -
Phac2g01380 327 Pfam Homeobox associated leucine zipper 141 182 IPR003106 GO:0006355|GO:0043565
Phac2g01380 327 MobiDBLite consensus disorder prediction 238 285 - -
Phac2g01380 327 FunFam Homeobox-leucine zipper protein HAT5 79 143 - -
Phac2g01380 327 Coils Coil 154 181 - -
Phac2g01380 327 MobiDBLite consensus disorder prediction 183 201 - -
Phac2g01380 327 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Phac2g01380 327 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 68 229 IPR045224 GO:0003700
Phac2g01380 327 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01380 Phac-Chr2 11730842 11734086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01380 43 274 Homeobox Transcription Factor Family AT3G01470 42.735 5.74e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac2g01380 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01380 - K09338 gmx:547565 455.292