Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g01376 | ATGTCGATGGACCTTTGTGCCGAAATCCACCGATCCTTCGACGACCGTTACACGCGCTACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTCACCATCACCGACCCCCACATCCCGGGCCATCCTATCGTCTTCGCAAGCCCGGGCTTCCTCAAGCTCACGGGCTACGACCGTTGTGAGGTCCTGGGCCAGACCGCCGCCATCTTCCAGGGCCCGCGCACTTCCCGGAGGTCGGTCATGGAAATTCGCGAGGCCGTCCGTGAGGAGCGCAACGCGCAGGTCGTTTTGCTCAACTACCGCAGGGACGGCACGCCGTTTTGGATGCTCTTCAGCGTCTGTCCCGTGTTCGGCGGCGACGGCGGCGCCGTCTTCCACTTCGTCGCTGTTCAGGTCCCGCTTCACAAAAAGGAGGGCTCCGGCGTCAGGGATTTCGGCTTCGGGTGCTGTCGGAAGGAAGTGTGCGCTGATTCATTATCTGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGTTGGAACGTGATGTCATTGAAATGGAGAGGGAAGAGCCGTGTGAGGCGAGTGCTGAGGAGAAGCAAAGTGCTGTCACAGCCATGGACAGGATCTTCTCTGTGCTAACCCATTTCAGTGAGGCAACTGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCCTTCTTGAAATTGACAGGTTATGGAAGAAATGAAGTTTTGGGTCGCAACTGTAGGTTTTTAGGTGGAACAGATACTGATACCTCTACTTTATATCTGATAAAGGAAAGCATTAAAGCTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGACGAAAGTTCATTTTGGAATTTTCTTCACATCTCACCCGTTCGTGATGCTTCTGGCAAGGTAATCTTGACAAACTATTTATTAGCTGAGCTATAA | 1041 | 0.5139 | MSMDLCAEIHRSFDDRYTRYARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYDRCEVLGQTAAIFQGPRTSRRSVMEIREAVREERNAQVVLLNYRRDGTPFWMLFSVCPVFGGDGGAVFHFVAVQVPLHKKEGSGVRDFGFGCCRKEVCADSLSELGRVCSVEQVLERDVIEMEREEPCEASAEEKQSAVTAMDRIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTGYGRNEVLGRNCRFLGGTDTDTSTLYLIKESIKAEQPCTVRILNYRKDESSFWNFLHISPVRDASGKVILTNYLLAEL* | 347 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g01376 | 346 | PANTHER | PROTEIN TWIN LOV 1 | 8 | 337 | - | - | |
Phac2g01376 | 346 | FunFam | Protein TWIN LOV 1 isoform D | 31 | 208 | - | - | |
Phac2g01376 | 346 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 29 | 127 | IPR035965 | - | |
Phac2g01376 | 346 | CDD | PAS | 28 | 131 | IPR000014 | - | |
Phac2g01376 | 346 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 247 | 337 | IPR035965 | - | |
Phac2g01376 | 346 | Gene3D | PAS domain | 244 | 343 | - | - | |
Phac2g01376 | 346 | SMART | pas_2 | 232 | 305 | IPR000014 | - | |
Phac2g01376 | 346 | SMART | pas_2 | 19 | 88 | IPR000014 | - | |
Phac2g01376 | 346 | ProSiteProfiles | PAS repeat profile. | 257 | 279 | IPR000014 | - | |
Phac2g01376 | 346 | Gene3D | PAS domain | 14 | 138 | - | - | |
Phac2g01376 | 346 | ProSiteProfiles | PAS repeat profile. | 17 | 90 | IPR000014 | - | |
Phac2g01376 | 346 | SMART | pac_2 | 94 | 137 | IPR001610 | - | |
Phac2g01376 | 346 | SMART | pac_2 | 307 | 346 | IPR001610 | - | |
Phac2g01376 | 346 | Pfam | PAS domain | 30 | 131 | IPR000014 | - | |
Phac2g01376 | 346 | Pfam | PAS domain | 244 | 338 | IPR000014 | - | |
Phac2g01376 | 346 | CDD | PAS | 253 | 337 | IPR000014 | - | |
Phac2g01376 | 346 | NCBIfam | PAS domain S-box protein | 257 | 336 | IPR000014 | - | |
Phac2g01376 | 346 | NCBIfam | PAS domain S-box protein | 43 | 125 | IPR000014 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g01376 | Phac-Chr2 | 11552641 | 11557403 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g01376 | 230 | 337 | AGC Kinase Gene Family | AT5G58140 | 40.741 | 6.38e-24 | 101 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g01376 | - | - | gmx:100785562 | 572.392 |