Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01376 ATGTCGATGGACCTTTGTGCCGAAATCCACCGATCCTTCGACGACCGTTACACGCGCTACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTCACCATCACCGACCCCCACATCCCGGGCCATCCTATCGTCTTCGCAAGCCCGGGCTTCCTCAAGCTCACGGGCTACGACCGTTGTGAGGTCCTGGGCCAGACCGCCGCCATCTTCCAGGGCCCGCGCACTTCCCGGAGGTCGGTCATGGAAATTCGCGAGGCCGTCCGTGAGGAGCGCAACGCGCAGGTCGTTTTGCTCAACTACCGCAGGGACGGCACGCCGTTTTGGATGCTCTTCAGCGTCTGTCCCGTGTTCGGCGGCGACGGCGGCGCCGTCTTCCACTTCGTCGCTGTTCAGGTCCCGCTTCACAAAAAGGAGGGCTCCGGCGTCAGGGATTTCGGCTTCGGGTGCTGTCGGAAGGAAGTGTGCGCTGATTCATTATCTGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGTTGGAACGTGATGTCATTGAAATGGAGAGGGAAGAGCCGTGTGAGGCGAGTGCTGAGGAGAAGCAAAGTGCTGTCACAGCCATGGACAGGATCTTCTCTGTGCTAACCCATTTCAGTGAGGCAACTGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCCTTCTTGAAATTGACAGGTTATGGAAGAAATGAAGTTTTGGGTCGCAACTGTAGGTTTTTAGGTGGAACAGATACTGATACCTCTACTTTATATCTGATAAAGGAAAGCATTAAAGCTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGACGAAAGTTCATTTTGGAATTTTCTTCACATCTCACCCGTTCGTGATGCTTCTGGCAAGGTAATCTTGACAAACTATTTATTAGCTGAGCTATAA 1041 0.5139 MSMDLCAEIHRSFDDRYTRYARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYDRCEVLGQTAAIFQGPRTSRRSVMEIREAVREERNAQVVLLNYRRDGTPFWMLFSVCPVFGGDGGAVFHFVAVQVPLHKKEGSGVRDFGFGCCRKEVCADSLSELGRVCSVEQVLERDVIEMEREEPCEASAEEKQSAVTAMDRIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTGYGRNEVLGRNCRFLGGTDTDTSTLYLIKESIKAEQPCTVRILNYRKDESSFWNFLHISPVRDASGKVILTNYLLAEL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01376 346 PANTHER PROTEIN TWIN LOV 1 8 337 - -
Phac2g01376 346 FunFam Protein TWIN LOV 1 isoform D 31 208 - -
Phac2g01376 346 SUPERFAMILY PYP-like sensor domain (PAS domain) 29 127 IPR035965 -
Phac2g01376 346 CDD PAS 28 131 IPR000014 -
Phac2g01376 346 SUPERFAMILY PYP-like sensor domain (PAS domain) 247 337 IPR035965 -
Phac2g01376 346 Gene3D PAS domain 244 343 - -
Phac2g01376 346 SMART pas_2 232 305 IPR000014 -
Phac2g01376 346 SMART pas_2 19 88 IPR000014 -
Phac2g01376 346 ProSiteProfiles PAS repeat profile. 257 279 IPR000014 -
Phac2g01376 346 Gene3D PAS domain 14 138 - -
Phac2g01376 346 ProSiteProfiles PAS repeat profile. 17 90 IPR000014 -
Phac2g01376 346 SMART pac_2 94 137 IPR001610 -
Phac2g01376 346 SMART pac_2 307 346 IPR001610 -
Phac2g01376 346 Pfam PAS domain 30 131 IPR000014 -
Phac2g01376 346 Pfam PAS domain 244 338 IPR000014 -
Phac2g01376 346 CDD PAS 253 337 IPR000014 -
Phac2g01376 346 NCBIfam PAS domain S-box protein 257 336 IPR000014 -
Phac2g01376 346 NCBIfam PAS domain S-box protein 43 125 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01376 Phac-Chr2 11552641 11557403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01376 230 337 AGC Kinase Gene Family AT5G58140 40.741 6.38e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01376 - - gmx:100785562 572.392