Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01374 ATGTCGATGGACCTTTGTGCCGAAATCCACCGATCCTTCGACGACCGTTACACGCGCTACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTCACCATCACCGACCCCCACATCCCGGGCCATCCTATCGTCTTCGCAAGCCCGGGCTTCCTCAAGCTCACGGGCTACGACCGTTGTGAGGTCCTGGGCCAGACCGCCGCCATCTTCCAGGGCCCGCGCACTTCCCGGAGGTCGGTCATGGAAATTCGCGAGGCCGTCCGTGAGGAGCGCAACGCGCAGGTCGTTTTGCTCAACTACCGCAGGGACGGCACGCCGTTTTGGATGCTCTTCAGCGTCTGTCCCGTGTTCGGCGGCGACGGCGGCGCCGTCTTCCACTTCGTCGCTGTTCAGGTCCCGCTTCACAAAAAGGAGGGCTCCGGCGTCAGGGATTTCGGCTTCGGGTGCTGTCGGAAGGAAGTGTGCGCTGATTCATTATCTGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGTTGGAACGTGATGTCATTGAAATGGAGAGGGAAGAGCCGTGTGAGGCGAGTGCTGAGGAGAAGCAAAGTGCTGTCACAGCCATGGACAGGATCTTCTCTGTGCTAACCCATTTCAGTGAGGCAACTGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCCTTCTTGAAATTGACAGATAAAGGAAAGCATTAA 822 0.5499 MSMDLCAEIHRSFDDRYTRYARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYDRCEVLGQTAAIFQGPRTSRRSVMEIREAVREERNAQVVLLNYRRDGTPFWMLFSVCPVFGGDGGAVFHFVAVQVPLHKKEGSGVRDFGFGCCRKEVCADSLSELGRVCSVEQVLERDVIEMEREEPCEASAEEKQSAVTAMDRIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTDKGKH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01374 273 ProSiteProfiles PAS repeat profile. 17 90 IPR000014 -
Phac2g01374 273 Pfam PAS domain 29 131 IPR000014 -
Phac2g01374 273 SUPERFAMILY PYP-like sensor domain (PAS domain) 29 127 IPR035965 -
Phac2g01374 273 Gene3D PAS domain 229 270 - -
Phac2g01374 273 Gene3D PAS domain 14 138 - -
Phac2g01374 273 FunFam Protein TWIN LOV 1 isoform D 31 208 - -
Phac2g01374 273 NCBIfam PAS domain S-box protein 43 125 IPR000014 -
Phac2g01374 273 CDD PAS 28 131 IPR000014 -
Phac2g01374 273 PANTHER PROTEIN TWIN LOV 1 8 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01374 Phac-Chr2 11552641 11557403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01374 16 269 AGC Kinase Gene Family AT5G58140 27.667 9.56e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01374 - - gmx:100785562 443.736