Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01372 ATGTCGATGGACCTTTGTGCCGAAATCCACCGATCCTTCGACGACCGTTACACGCGCTACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTCACCATCACCGACCCCCACATCCCGGGCCATCCTATCGTCTTCGCAAGCCCGGGCTTCCTCAAGCTCACGGGCTACGACCGTTGTGAGGTCCTGGGCCAGACCGCCGCCATCTTCCAGGGCCCGCGCACTTCCCGGAGGTCGGTCATGGAAATTCGCGAGGCCGTCCGTGAGGAGCGCAACGCGCAGGTCGTTTTGCTCAACTACCGCAGGGACGGCACGCCGTTTTGGATGCTCTTCAGCGTCTGTCCCGTGTTCGGCGGCGACGGCGGCGCCGTCTTCCACTTCGTCGCTGTTCAGGTCCCGCTTCACAAAAAGGAGGGCTCCGGCGTCAGGGATTTCGGCTTCGGGTGCTGTCGGAAGGAAGTGTGCGCTGATTCATTATCTGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGTTGGAACGTGATGTCATTGAAATGGAGAGGGAAGAGCCGTGTGAGGCGAGTGCTGAGGAGAAGCAAAGTGCTGTCACAGCCATGGACAGGATCTTCTCTGTGCTAACCCATTTCAGTGAGGCAACTGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCCTTCTTGAAATTGACAGGTTATGGAAGAAATGAAGTTTTGGGTCGCAACTGTAGGTTTTTAGGTGGAACAGATACTGATACCTCTACTTTATATCTGGTAGTATGA 894 0.538 MSMDLCAEIHRSFDDRYTRYARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYDRCEVLGQTAAIFQGPRTSRRSVMEIREAVREERNAQVVLLNYRRDGTPFWMLFSVCPVFGGDGGAVFHFVAVQVPLHKKEGSGVRDFGFGCCRKEVCADSLSELGRVCSVEQVLERDVIEMEREEPCEASAEEKQSAVTAMDRIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTGYGRNEVLGRNCRFLGGTDTDTSTLYLVV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01372 297 ProSiteProfiles PAS repeat profile. 257 279 IPR000014 -
Phac2g01372 297 FunFam Protein TWIN LOV 1 isoform D 31 208 - -
Phac2g01372 297 ProSiteProfiles PAS repeat profile. 17 90 IPR000014 -
Phac2g01372 297 CDD PAS 253 283 IPR000014 -
Phac2g01372 297 Gene3D PAS domain 14 138 - -
Phac2g01372 297 PANTHER PROTEIN TWIN LOV 1 8 294 - -
Phac2g01372 297 NCBIfam PAS domain S-box protein 43 125 IPR000014 -
Phac2g01372 297 SUPERFAMILY PYP-like sensor domain (PAS domain) 247 290 IPR035965 -
Phac2g01372 297 CDD PAS 28 131 IPR000014 -
Phac2g01372 297 SUPERFAMILY PYP-like sensor domain (PAS domain) 29 127 IPR035965 -
Phac2g01372 297 Gene3D PAS domain 244 296 - -
Phac2g01372 297 Pfam PAS domain 29 131 IPR000014 -
Phac2g01372 297 Pfam PAS domain 244 284 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01372 Phac-Chr2 11552641 11557403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01372 16 296 AGC Kinase Gene Family AT5G58140 29.969 1.03e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01372 - - gmx:100785562 494.967