Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01371 ATGTCGATGGACCTTTGTGCCGAAATCCACCGATCCTTCGACGACCGTTACACGCGCTACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTCACCATCACCGACCCCCACATCCCGGGCCATCCTATCGTCTTCGCAAGCCCGGGCTTCCTCAAGCTCACGGGCTACGACCGTTGTGAGGTCCTGGGCCAGACCGCCGCCATCTTCCAGGGCCCGCGCACTTCCCGGAGGTCGGTCATGGAAATTCGCGAGGCCGTCCGTGAGGAGCGCAACGCGCAGGTCGTTTTGCTCAACTACCGCAGGGACGGCACGCCGTTTTGGATGCTCTTCAGCGTCTGTCCCGTGTTCGGCGGCGACGGCGGCGCCGTCTTCCACTTCGTCGCTGTTCAGGTCCCGCTTCACAAAAAGGAGGGCTCCGGCGTCAGGGATTTCGGCTTCGGGTGCTGTCGGAAGGAAGTGTGCGCTGATTCATTATCTGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGTTGGAACGTGATGTCATTGAAATGGAGAGGGAAGAGCCGTGTGAGGCGAGTGCTGAGGAGAAGCAAAGTGCTGTCACAGCCATGGACAGGATCTTCTCTGTGCTAACCCATTTCAGTGAGGCAACTGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCCTTCTTGAAATTGACAGGTTATGGAAGAAATGAAGTTTTGGGTCGCAACTGTAGGTTTTTAGGTGGAACAGATACTGATACCTCTACTTTATATCTGATAAAGGAAAGCATTAAAGCTGAACAACCATGCACAGAAGGACGAAAGTTCATTTTGGAATTTTCTTCACATCTCACCCGTTCGTGA 972 0.5267 MSMDLCAEIHRSFDDRYTRYARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYDRCEVLGQTAAIFQGPRTSRRSVMEIREAVREERNAQVVLLNYRRDGTPFWMLFSVCPVFGGDGGAVFHFVAVQVPLHKKEGSGVRDFGFGCCRKEVCADSLSELGRVCSVEQVLERDVIEMEREEPCEASAEEKQSAVTAMDRIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTGYGRNEVLGRNCRFLGGTDTDTSTLYLIKESIKAEQPCTEGRKFILEFSSHLTRS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01371 323 Gene3D PAS domain 14 138 - -
Phac2g01371 323 CDD PAS 28 131 IPR000014 -
Phac2g01371 323 SUPERFAMILY PYP-like sensor domain (PAS domain) 29 127 IPR035965 -
Phac2g01371 323 Pfam PAS domain 30 131 IPR000014 -
Phac2g01371 323 Pfam PAS domain 244 301 IPR000014 -
Phac2g01371 323 SMART pas_2 232 305 IPR000014 -
Phac2g01371 323 SMART pas_2 19 88 IPR000014 -
Phac2g01371 323 NCBIfam PAS domain S-box protein 43 125 IPR000014 -
Phac2g01371 323 SUPERFAMILY PYP-like sensor domain (PAS domain) 247 307 IPR035965 -
Phac2g01371 323 ProSiteProfiles PAS repeat profile. 257 279 IPR000014 -
Phac2g01371 323 ProSiteProfiles PAS repeat profile. 17 90 IPR000014 -
Phac2g01371 323 CDD PAS 253 283 IPR000014 -
Phac2g01371 323 PANTHER PROTEIN TWIN LOV 1 8 308 - -
Phac2g01371 323 Gene3D PAS domain 244 312 - -
Phac2g01371 323 FunFam Protein TWIN LOV 1 isoform D 31 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01371 Phac-Chr2 11552641 11557403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01371 16 312 AGC Kinase Gene Family AT5G58140 29.630 3.22e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01371 - - gmx:100785562 514.998