Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01353 ATGATTGTCTCTTGTATGTGTCATCATTATTGCATGCAGGATCAAAAGCTCGAATCTGCTAAGAAGAAAATGGAAGAGGCTAGAGAAGAAAACAAGATGTTGAAGTTCTTGGACATCCTTGAACAAGATAAACCTGAAGATGCTACAAATGCTAAAGGTGTAAATAGCCAAAGTGAAGAGAGTGAACTTTTGTCACTCTCTCTTGGGATATCATTCAAAGGAAAGATTAAGGGTGAGAGGAAGCAAGATGAGGGTATGGATAAAGGACTCACACTTGGGTTAGATATCAATTTGGATCCGGTAGATCATGCTGAAGCTGCAAATATTTTCAGCTCTGCAAGTAGCTTAGGTGGAGGGAAGGAAGAGGCACCAAGTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATGAAAAATGTGGATAAAAGTGAAGCTTATCAAAATGATCAGCCCAAGAAGACTAGGGTTTCCATTAGAGCCAGATGTGATACACAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGTCCCCGAGCTTACTATCGATGCACTGTTTCTCCATTGTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATCACAACCTATGAAGGAACCCACAATCATCCACTGCCTATGTCAGCCATTGCAATGGCCTGCACAACATCTGCTGCAGTTTCCATGCTCCAATGTCCCTCACTGAGTTCAGAGCATGGACATGGACTAGTCAATTCAGCTATATCCTCCATTACCAAATTTAGTGCTCCTAATTACAACCCTGATAATGCTGTAAACTTCTCCACATACCAAATTTCAAGACCACATCAATTCTACTTTCCAAACTCATCTATTTCAAGCTTGAATTATCACCCCACAATCACTTTGGACCTTACAGCACCCCCAACATCCTCAAACTCAAGCTTCACTCACATGCCAAAATTCTCATCAACAAACCTTAATTTTTCCTCAGATTTCTCTCCTCTACAATCTATCATGCCTCCATCACCTTGGAGCAGTTACAGTGATTACTTCAACTCAAGAGCACTAACCCATAATATAAACCACGGTGGTTACTTGTTAAACACTGGAAGTCAAAATCAGCCATATCTTGAGCATCTCCATCAACCTATTTGCATGACCAACAATAACTTTCCTCAACGGTTTTTGCCGGATTCCATTATTGCTGCTACCAAGGCAATCACAAGCAATCCAAAATTTCAATCAGTGTTAGCAACTGCCCTCACAACATATGTTGGCAATGAAGCCAGTGGTGGTAGGTTAAGAGAAAACCATGTTCTTGAGAATGCAGAACTAAGCTTAAAGCTATGTAGTGAAAAATAG 1389 0.4075 MIVSCMCHHYCMQDQKLESAKKKMEEAREENKMLKFLDILEQDKPEDATNAKGVNSQSEESELLSLSLGISFKGKIKGERKQDEGMDKGLTLGLDINLDPVDHAEAANIFSSASSLGGGKEEAPSEMWPPSKVLKTMKNVDKSEAYQNDQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPLCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSAIAMACTTSAAVSMLQCPSLSSEHGHGLVNSAISSITKFSAPNYNPDNAVNFSTYQISRPHQFYFPNSSISSLNYHPTITLDLTAPPTSSNSSFTHMPKFSSTNLNFSSDFSPLQSIMPPSPWSSYSDYFNSRALTHNINHGGYLLNTGSQNQPYLEHLHQPICMTNNNFPQRFLPDSIIAATKAITSNPKFQSVLATALTTYVGNEASGGRLRENHVLENAELSLKLCSEK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01353 462 Pfam WRKY DNA -binding domain 168 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01353 462 ProSiteProfiles WRKY domain profile. 162 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01353 462 Coils Coil 17 37 - -
Phac2g01353 462 Gene3D WRKY domain 152 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g01353 462 FunFam probable WRKY transcription factor 31 152 229 - -
Phac2g01353 462 SMART WRKY_cls 167 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g01353 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 437 IPR044810 GO:0003700
Phac2g01353 462 SUPERFAMILY WRKY DNA-binding domain 160 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01353 Phac-Chr2 11259000 11261028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01353 13 451 WRKY Transcription Factor Family AT5G15130 35.976 2.57e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g01353 WRKY 5.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01353 - - pvu:PHAVU_002G089700g 830.476