LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g01345	ATGGGGAAAGGAAGAAGTCCTGGCAAATGGTTCAAGAACTTACTCTTGGGGAAGAAATCGTCGTCAAAGTCTACTTCATCAAAGAAGAATGATATTTTTAAACCATCAAGTGATAAGGATGTGGTGGTGTCTTCTGAGGTACCTGTGTCTGATCCACCTGTTAATTCTCTGCTGATATCGCCGCCGATATCTGGAGCTAATGATACTAAAGTAGTGCTTTCAGAAAAGGAGGTAGTTAGTAGATCTTCACTTGATAAGAATATTCTTTCAACTGGAGATGAAGAGGCTAAGGTGCAGGATGTGGCTAATTTTGGATCTCAAGAGGATACTGAGAAACTTCAGCTTACAGAAGCAGCTATAAAAGTTCAGGCCGCTTGTAGAAGCTATCTGGCTCGTCAAACATTTCAAACTCTCAGAGGTGCCATACAACTACAATCTCTCATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTGCAATGTTAGACGTTCTGATATTGGGCATGCAGTCCAGAAAATTTGTAAGGATACTCATTGTTCAAATTCTATTTCGGTAGTTTCATCCTCACAGAAAGAGAAGCTGTCTGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCTCCATTGATCAAGAAGAAACTAACTTGGCTTGGAAGTGGCTTGACTATTGGACACAGTCACACTTTTGGGCACCTCTTCCTGAATTGAAAAAGAAATTTGATTCAGTGTTTGATGAGAAAAATGGCAGTTCCCAGACAGTTCAAAGGGGACAAGTTAAAAGAACTACTCGAAAATCTTCTGCTGTGAAAGCTGACAATGGCTCAGTTTTAGTTGCTAAAACTGATACAAAAAAGGAACACCCTCAAAGATCTAAACAGCGTCCAAAAAAGGATACAAGCCATCCATTGCCAACAGCTCAGGAACACCCTCAAAAAGAAACTGAGAAAAGTAGTCTTGAAAAAAAACATGCACATAATGTTTCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAACACAGCAGTAGAAAGATTTTAGATCATACTGTCACTGATGTTTTAGAGCAGGGCCCAAGTGCCTCTTCAGAGAAAATGGAAGATTTGGCAGTGGCAAAGTCAGAAGAGTCTGATCCTGAGAAGGGTCATGGACAGCCAGCAAAAGATGAGAATGATAATGAGCCACATCATGATCCTATTGCTGTTTTAAAGACGAGTGTGAAGAAGGGTGAAAATGAAAAAAATCAAGGAGTTGGTGAGGATCGGAACAGTGGTGGTGATAATTGTGTCAGTAACAATTCCCAGAGAAGAGCTTCACTACCTGCGAACTTTAATGATCCAGATAATGAGTTATATACCACTCCTGTTACTCCAAGGCTGCCCAGTTATATGGCTCCTACCGAATCTGCAAAGGCTAAGCTCAGAGGACAGAGCTCTCCAAGATTTGCTACTGATTTGGTAGAAAAGAGCAATACAACCAGGCGGCATTCACTTTCATCCTCACTCAATGGCAGGTCAGGTTCATTTTCCCCGAGAGATGAAAGGCTGATGGCTGTGAGTGGCAGAGGAGTGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGAACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA	1722	0.4141	MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSSDKDVVVSSEVPVSDPPVNSLLISPPISGANDTKVVLSEKEVVSRSSLDKNILSTGDEEAKVQDVANFGSQEDTEKLQLTEAAIKVQAACRSYLARQTFQTLRGAIQLQSLIRGHLVRRQAVSALYCVKGIVKFQALARGCNVRRSDIGHAVQKICKDTHCSNSISVVSSSQKEKLSENVFVCKLLASSPYAVPLSLSIDQEETNLAWKWLDYWTQSHFWAPLPELKKKFDSVFDEKNGSSQTVQRGQVKRTTRKSSAVKADNGSVLVAKTDTKKEHPQRSKQRPKKDTSHPLPTAQEHPQKETEKSSLEKKHAHNVSNGSEVVNEKRKHSSRKILDHTVTDVLEQGPSASSEKMEDLAVAKSEESDPEKGHGQPAKDENDNEPHHDPIAVLKTSVKKGENEKNQGVGEDRNSGGDNCVSNNSQRRASLPANFNDPDNELYTTPVTPRLPSYMAPTESAKAKLRGQSSPRFATDLVEKSNTTRRHSLSSSLNGRSGSFSPRDERLMAVSGRGVIRSDRSLSSSRDGTEKLIQPQWRR*	574

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	17	31	-	-
	Phac2g01345	573	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	110	181	IPR027417	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	393	445	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	272	573	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	551	565	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	305	376	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	446	481	-	-
	Phac2g01345	573	Pfam	Protein of unknown function (DUF4005)	468	552	IPR025064	-
	Phac2g01345	573	ProSiteProfiles	IQ motif profile.	139	166	IPR000048	GO:0005515
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	508	533	-	-
	Phac2g01345	573	Pfam	IQ calmodulin-binding motif	139	156	IPR000048	GO:0005515
	Phac2g01345	573	Pfam	IQ calmodulin-binding motif	116	136	IPR000048	GO:0005515
	Phac2g01345	573	Gene3D	-	112	162	-	-
	Phac2g01345	573	SMART	iq_5	114	136	IPR000048	GO:0005515
	Phac2g01345	573	SMART	iq_5	137	158	IPR000048	GO:0005515
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	272	296	-	-
	Phac2g01345	573	PANTHER	IQ-DOMAIN 5-RELATED	1	530	-	-
	Phac2g01345	573	ProSiteProfiles	IQ motif profile.	115	143	IPR000048	GO:0005515
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	17	56	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g01345	Phac-Chr2	11191605	11196856	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g01345	4	573	IQD Protein Family	AT1G14380	35.332	3.41e-77	253

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g01345	-		-	gmx:100800548	834.713