LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g01345	ATGGGGAAAGGAAGAAGTCCTGGCAAATGGTTCAAGAACTTACTCTTGGGGAAGAAATCGTCGTCAAAGTCTACTTCATCAAAGAAGAATGATATTTTTAAACCATCAAGTGATAAGGATGTGGTGGTGTCTTCTGAGGTACCTGTGTCTGATCCACCTGTTAATTCTCTGCTGATATCGCCGCCGATATCTGGAGCTAATGATACTAAAGTAGTGCTTTCAGAAAAGGAGGTAGTTAGTAGATCTTCACTTGATAAGAATATTCTTTCAACTGGAGATGAAGAGGCTAAGGTGCAGGATGTGGCTAATTTTGGATCTCAAGAGGATACTGAGAAACTTCAGCTTACAGAAGCAGCTATAAAAGTTCAGGCCGCTTGTAGAAGCTATCTGGCTCGTCAAACATTTCAAACTCTCAGAGGTGCCATACAACTACAATCTCTCATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTGCAATGTTAGACGTTCTGATATTGGGCATGCAGTCCAGAAAATTTGTAAGGATACTCATTGTTCAAATTCTATTTCGGTAGTTTCATCCTCACAGAAAGAGAAGCTGTCTGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCTCCATTGATCAAGAAGAAACTAACTTGGCTTGGAAGTGGCTTGACTATTGGACACAGTCACACTTTTGGGCACCTCTTCCTGAATTGAAAAAGAAATTTGATTCAGTGTTTGATGAGAAAAATGGCAGTTCCCAGACAGTTCAAAGGGGACAAGTTAAAAGAACTACTCGAAAATCTTCTGCTGTGAAAGCTGACAATGGCTCAGTTTTAGTTGCTAAAACTGATACAAAAAAGGAACACCCTCAAAGATCTAAACAGCGTCCAAAAAAGGATACAAGCCATCCATTGCCAACAGCTCAGGAACACCCTCAAAAAGAAACTGAGAAAAGTAGTCTTGAAAAAAAACATGCACATAATGTTTCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAACACAGCAGTAGAAAGATTTTAGATCATACTGTCACTGATGTTTTAGAGCAGGGCCCAAGTGCCTCTTCAGAGAAAATGGAAGATTTGGCAGTGGCAAAGTCAGAAGAGTCTGATCCTGAGAAGGGTCATGGACAGCCAGCAAAAGATGAGAATGATAATGAGCCACATCATGATCCTATTGCTGTTTTAAAGACGAGTGTGAAGAAGGGTGAAAATGAAAAAAATCAAGGAGTTGGTGAGGATCGGAACAGTGGTGGTGATAATTGTGTCAGTAACAATTCCCAGAGAAGAGCTTCACTACCTGCGAACTTTAATGATCCAGATAATGAGTTATATACCACTCCTGTTACTCCAAGGCTGCCCAGTTATATGGCTCCTACCGAATCTGCAAAGGCTAAGCTCAGAGGACAGAGCTCTCCAAGATTTGCTACTGATTTGGTAGAAAAGAGCAATACAACCAGGCGGCATTCACTTTCATCCTCACTCAATGGCAGGTCAGGTTCATTTTCCCCGAGAGATGAAAGGCTGATGGCTGTGAGTGGCAGAGGAGTGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGAACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA	1722	0.4141	MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSSDKDVVVSSEVPVSDPPVNSLLISPPISGANDTKVVLSEKEVVSRSSLDKNILSTGDEEAKVQDVANFGSQEDTEKLQLTEAAIKVQAACRSYLARQTFQTLRGAIQLQSLIRGHLVRRQAVSALYCVKGIVKFQALARGCNVRRSDIGHAVQKICKDTHCSNSISVVSSSQKEKLSENVFVCKLLASSPYAVPLSLSIDQEETNLAWKWLDYWTQSHFWAPLPELKKKFDSVFDEKNGSSQTVQRGQVKRTTRKSSAVKADNGSVLVAKTDTKKEHPQRSKQRPKKDTSHPLPTAQEHPQKETEKSSLEKKHAHNVSNGSEVVNEKRKHSSRKILDHTVTDVLEQGPSASSEKMEDLAVAKSEESDPEKGHGQPAKDENDNEPHHDPIAVLKTSVKKGENEKNQGVGEDRNSGGDNCVSNNSQRRASLPANFNDPDNELYTTPVTPRLPSYMAPTESAKAKLRGQSSPRFATDLVEKSNTTRRHSLSSSLNGRSGSFSPRDERLMAVSGRGVIRSDRSLSSSRDGTEKLIQPQWRR*	574

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	17	31	-	-
	Phac2g01345	573	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	110	181	IPR027417	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	393	445	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	272	573	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	551	565	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	305	376	-	-
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	446	481	-	-
	Phac2g01345	573	Pfam	Protein of unknown function (DUF4005)	468	552	IPR025064	-
	Phac2g01345	573	ProSiteProfiles	IQ motif profile.	139	166	IPR000048	GO:0005515
	Phac2g01345	573	MobiDBLite	consensus disorder prediction	508	533	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g01345	Phac-Chr2	11191605	11196856	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g01345	4	573	IQD Protein Family	AT1G14380	35.332	3.41e-77	253

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g01345	-		-	gmx:100800548	834.713

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