Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01342 ATGGGTTCTAGTATTGTTGATGGAATCTCTAAAGCTACACCTTCCAGCTTATCTATTCCATCATACAGTGAAAAAAGCAACGCCTTAAGTCTTCCCACACCAAGGTCTGAGGGGGAAATCTTGTCTTCTCCCAATCTCAAGTCCTTCACATTCAATGAGCTGAAGAATGCCACCAGAAATTTTCGGCCTGATAGTCTTCTCGGTGAAGGGGGATTTGGGTGCGTCTACAAAGGATGGATTGATGAACACACATTTACAGCTTCAAAGCCTGGATCAGGAATGGTTGTTGCTGTAAAGAAGCTCAAACCTGAAGGTTTTCAAGGTCATAAAGAGTGGTTGACTGAGGTTAACTACCTTGGGCAACTGTACCATCCTAATCTGGTGAAATTAATTGGTTACTGCTTGGAGGGAGAGAATCGGCTATTGGTCTATGAGTTTATGCCGAAAGGGAGCTTGGAGAACCATCTGTTTAGAAGAGGACCACAACCACTCTCTTGGTCGGTGAGGATGAAAGTGGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCATAACGCCAATTCACAAGTCATATACCGTGATTTTAAAGCCTCTAATATCCTACTTGATGCGGAGTTCAATGCTAAACTTTCTGACTTTGGTTTAGCTAAGGCGGGTCCTACCGGTGATAGAACTCACGTCTCTACTCAAGTCATGGGTACTCAAGGATATGCAGCACCTGAATATGTTGCAACTGGTAGGTTGACAGCCAAAAGTGATGTCTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCTGGAAGACGTGCAGTTGATAAAACAATAGCTGGTATGGAGCAGAATCTGGTGGACTGGGCAAAACCATATTTGAGCGACAAACGAAGACTGTTCCGGATCATGGATACCAAGTTGGAGGGGCAGTACCCGCAAAAGGGTGCCTTCATGGCTGCCACACTTTCTCTACAATGCCTCAACACTGAGGCCAAGACAAGGCCTCCAATGACAGAGGTTTTAGCCACTCTGGAACAGATAGAAGCCCCCAAAACTACAACCAGAAACTCTCATTCTTCAGAACACCATAGAGTTCACACTCCTGTGAGAAAATCTCCAGCGCGAAATCGGTCACCTCTGAATCTAACTCCTACCGCATCCCCTCTTCATGCTCACCGGCAATCGCCTCGTGTGCACTGA 1191 0.4559 MGSSIVDGISKATPSSLSIPSYSEKSNALSLPTPRSEGEILSSPNLKSFTFNELKNATRNFRPDSLLGEGGFGCVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNANSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTIAGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFMAATLSLQCLNTEAKTRPPMTEVLATLEQIEAPKTTTRNSHSSEHHRVHTPVRKSPARNRSPLNLTPTASPLHAHRQSPRVH* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01342 396 ProSitePatterns Protein kinases ATP-binding region signature. 67 100 IPR017441 GO:0005524
Phac2g01342 396 MobiDBLite consensus disorder prediction 1 38 - -
Phac2g01342 396 ProSiteProfiles Protein kinase domain profile. 61 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01342 396 MobiDBLite consensus disorder prediction 371 387 - -
Phac2g01342 396 CDD STKc_IRAK 67 344 - -
Phac2g01342 396 MobiDBLite consensus disorder prediction 344 396 - -
Phac2g01342 396 FunFam Serine/threonine-protein kinase BIK1 29 146 - -
Phac2g01342 396 Gene3D Phosphorylase Kinase; domain 1 37 146 - -
Phac2g01342 396 Pfam Protein tyrosine and serine/threonine kinase 65 340 IPR001245 GO:0004672|GO:0006468
Phac2g01342 396 PANTHER OS01G0588500 PROTEIN-RELATED 32 345 - -
Phac2g01342 396 FunFam Probable serine/threonine-protein kinase PBL8 147 361 - -
Phac2g01342 396 Gene3D Transferase(Phosphotransferase) domain 1 147 368 - -
Phac2g01342 396 SUPERFAMILY Protein kinase-like (PK-like) 33 341 IPR011009 -
Phac2g01342 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01342 Phac-Chr2 11113883 11117538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01342 37 341 Glycoside Hydrolase AT3G07070 53.247 4.15e-112 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac2g01342 PK_Tyr_Ser-Thr 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01342 - - gmx:100809778 745.347