Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01333 ATGGCTTTCTTCCCAGCAAATTTCATGCTCCAAACCCCTCACCATGATGATCATCAACCTCCACCTTCTCTCACGTCAATTCTACCCGCGTGTACACCTCAAGAATATCATGGGGGAGTGACCTTTCTAGGAAAGAGATCCATGTCATTTTCATCAGGACTTGAGCACGGAGAAGAAGCCAATGCTGAGGAAGATTTGTCCGATGATGGATCACAGGCAGGGGAGAAGAAGAGGAGGCTTAACATGGAACAGGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGGAATAAGCTTGAGCCAGAGAGAAAAATGCAACTTGCAAGAGCTCTTGGATTGCAGCCAAGACAAATTGCTATATGGTTCCAGAACAGAAGGGCTAGGTGGAAGACCAAGCAGTTGGAGAAAGACTACGATCTCCTCAAAAGACAGTTTGAAGCCGTCAAGTCAGATAATGATGCACTTCAAACTCAGAACCAAAAACTTCAGGCTGAGATATTGGCACTGAAAAGTAGAGAGCCAACTGAATCTATCAACCTTAACAAAGAAACAGAAGGATCCTGCAGCAATAGAAGTGAGAACAGCTCAGACATCAAGTTGGATATCTCAAGGACACCAGCTATTGACAGTCCTCTATCTACACATCAGCCGAGCAGACCCCTCTTTCCATCTTCTGCTAGGCCTGCAGGAGTAGCTCAGCTTTTCCAAACTTCTTCAAGACCTGACCTTCCATGCCAAAAGATTGACCAAATGGTCAAAGAAGAAAGCCTAAGCAACATGTTCTGTGGCATGGATGATCAATCCGGGTTTTGGCCATGGTTGGAGCAGCAGCATTTCAATTGA 840 0.4548 MAFFPANFMLQTPHHDDHQPPPSLTSILPACTPQEYHGGVTFLGKRSMSFSSGLEHGEEANAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKSDNDALQTQNQKLQAEILALKSREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHQPSRPLFPSSARPAGVAQLFQTSSRPDLPCQKIDQMVKEESLSNMFCGMDDQSGFWPWLEQQHFN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01333 279 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Phac2g01333 279 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Phac2g01333 279 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Phac2g01333 279 Pfam Homeobox associated leucine zipper 131 171 IPR003106 GO:0006355|GO:0043565
Phac2g01333 279 CDD homeodomain 76 132 IPR001356 GO:0003677
Phac2g01333 279 FunFam Homeobox-leucine zipper protein ATHB-13 68 135 - -
Phac2g01333 279 MobiDBLite consensus disorder prediction 179 199 - -
Phac2g01333 279 SUPERFAMILY Homeodomain-like 67 133 IPR009057 -
Phac2g01333 279 MobiDBLite consensus disorder prediction 176 199 - -
Phac2g01333 279 SMART HOX_1 74 135 IPR001356 GO:0003677
Phac2g01333 279 Gene3D - 68 137 - -
Phac2g01333 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 53 207 IPR045224 GO:0003700
Phac2g01333 279 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Phac2g01333 279 MobiDBLite consensus disorder prediction 53 80 - -
Phac2g01333 279 Coils Coil 123 171 - -
Phac2g01333 279 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01333 Phac-Chr2 10969310 10972604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01333 1 279 Homeobox Transcription Factor Family AT1G69780 65.424 1.20e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac2g01333 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01333 K09338 - gmx:100814080 529.25