Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01329 ATGAAAAGTCCCATCTTGCTTGCAACAAAGTATGGGGATATTGAATTTGGTTTCTTTCCAACTGTTGCACCCAAAACTGTTGAGCATATTTTTAAGCTCGTGCAACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTTGTGGCCCAAGTAGCAGATGTTGCGAATGGAAGATCAGCTCCCATGAATGAGGATCAGAAAAGAGAGGCTGAAAAGACTGTTGTTGGTGAATTTAGTGACGTCAAACATGTTCGGGGTATTCTTTCCATGGGAAGGTATGATGATCCAGACAGTGGTTCATCCTCATTTTCAATACTACTTGGAGAGTCTCCTCATCTTGATGGAAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGATGAAACATTGGCAAAGCTCGAGCAACTACCTACCCGTAAAGAGGGTATATTTGTAATGCCAATGGAACGCATCACCATCTTGTCATCATATTACTATGACAAAGACACAGAAAATTGTCAGCAAGACAGATCAATTTTGAAGCTTAAACTAGCTGCCTCAGCTGTCGAAGTTGAACGACAGAGGATGAAGTGCTTCCCCTGA 594 0.4125 MKSPILLATKYGDIEFGFFPTVAPKTVEHIFKLVQLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEDQKREAEKTVVGEFSDVKHVRGILSMGRYDDPDSGSSSFSILLGESPHLDGKYAIFGKVTKGDETLAKLEQLPTRKEGIFVMPMERITILSSYYYDKDTENCQQDRSILKLKLAASAVEVERQRMKCFP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01329 197 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 90 105 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 CDD cyclophilin 7 159 - -
Phac2g01329 197 Gene3D - 1 169 IPR029000 -
Phac2g01329 197 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 158 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 SUPERFAMILY Cyclophilin-like 6 165 IPR029000 -
Phac2g01329 197 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 12 162 IPR002130 GO:0000413|GO:0003755
Phac2g01329 197 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 5 197 IPR044233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01329 Phac-Chr2 10759757 10765221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01329 2 163 U-box Gene Family AT5G67530 26.061 1.74e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01329 - - gmx:100819238 352.058