Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01305 ATGATGGAAGACATAAATAATGATGGTGAGAAACTTGATGAAGTTATGCTACCTGGGTTCAGGTTTCATCCAACTGATGAGGAGCTTGTAGGGTTTTACCTCAAGAGGAAGATCCAGCAACGCCCTTTGACTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGACCCTTGGGATCTTCCAAAGTTGGCGACGACTGGAGAGAAAGAGTGGTATTTCTATTGTCCGAGGGATAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACCGGAGCTGGGTTCTGGAAAGCTACAGGGACTGATAGGCCTATCTACTCCTCAGAAGGTTCAAAGTGCATTGGCCTGAAGAAATCTCTAGTGTTTTATAAGGGTAGAGCTGCCAAAGGAGTTAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCTCTCACAGACTCACTATCCACAAAGTACGTAGACAAGACCATTCCTGCTAATGGATCATGGGCTATCTGCAGGATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTTTATCTCACTCTTGGGTCTCTTCCCTCCCTGAAACAAGAACCTCTCATCATATCCTAACCAAAGATCAAGACAGCACCCAGTTTTGTTCAGACATATCATTTACAAAGAAAACAACCTTAGCCAGCCAGTACTGTACTAACAATTACAATGATGGACCACCTTTAACCCCTAATAGTAGTACAACACTTTGTCCCTTTGATGCTGCCTCATACAAATCCATCATTAACCCATTGCTTTACAAAGCCTTTGATAATTTTCCCATTTCAAATGGAGACCTTGGCACCAGCTTTCTATTCTCATCATCTCCTTTTGAAACGTCAGATGGTAATACTAATGCTAAATCTACAATGGACGTTTCTTCCATGTTGTTGAACATGTCATCATCGGTGCTTGGAGATTTCAACAAGACTTCAGAGGATAATACAAATACAAGTACAAGCTTTGGTGGGGTGCAAGAACAGTGTAGTGGCTACCCATTACCATTTCTACGTGAGATGCAAACTACATTTGGTGACCCACAATATGATAATATTAATGCATTGGTAAAGGCTCCTAATGTGAATATGCCTCGTGTTGAGGACCAAGAGTTAGGCTTAGAGTTGGAAACAGTAAGATCCATTGGGTTTCCATTCAGTGGCATGCCATTCAATATTGGCGATGCATGGAAGTCAAATATGCTTTGGGATACTTCCTCTTTTCCTTCTGATGTCTCATCTACTTATTCCACAACTAAGTGCAATACTTAG 1290 0.4116 MMEDINNDGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSTKYVDKTIPANGSWAICRIFKKTNSTAQRALSHSWVSSLPETRTSHHILTKDQDSTQFCSDISFTKKTTLASQYCTNNYNDGPPLTPNSSTTLCPFDAASYKSIINPLLYKAFDNFPISNGDLGTSFLFSSSPFETSDGNTNAKSTMDVSSMLLNMSSSVLGDFNKTSEDNTNTSTSFGGVQEQCSGYPLPFLREMQTTFGDPQYDNINALVKAPNVNMPRVEDQELGLELETVRSIGFPFSGMPFNIGDAWKSNMLWDTSSFPSDVSSTYSTTKCNT* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01305 429 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 256 - -
Phac2g01305 429 Gene3D NAC domain 25 178 IPR036093 GO:0003677|GO:0006355
Phac2g01305 429 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Phac2g01305 429 ProSiteProfiles NAC domain profile. 16 173 IPR003441 GO:0003677|GO:0006355
Phac2g01305 429 FunFam NAC domain-containing protein 35 25 176 - -
Phac2g01305 429 SUPERFAMILY NAC domain 15 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01305 Phac-Chr2 10119910 10121546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01305 2 386 NAC Transcription Factor Family AT1G26870 51.870 1.07e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g01305 NAM 7.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01305 - - gmx:100783995 694.886