Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01301 ATGGACCTCACCAACAACGCCAATACTACACACACAAATCCTCAAACCCCCCAACACCCCACCACCAAGCGCCACCGCCCCACCACCGTTCCTCCGCCCTCACAACCACCGTCCGCGGTCGTTTGCTACAAGGAGTGCCTCAAAAACCACGCTGCCAGCATAGGTGGCCACGCGCTTGATGGATGCGGAGAATTCATGCCCTCCTCTTCCTCCAATCCCACAGAACCACGCTCGCTAACGTGCGCCGCCTGTGGATGCCACCGTAACTTCCACCACCGTGACACACAACAGTATCACTCCAACCCCAGGCCAAATTTCATAAGCTTTTACCACTCACCGCCGCCACCCCATCATGGCCCGGGCCTGTGCACTAGCCCAAGCCCAAGCCCGTTGTCAAGCCCCAGCCCGCCGCCTCTCTCCCACCATTTCCCTGGGCGCAGACCAGTCCTGGGGCTCTTTGGCCCGGGAAACGAGCATCGCCACACGAGTTTCCATCTTTCCGAGAGGCCGAGTGGAAAGAAGAGGTTCAGGACCAAGTTCAGCCAAGAGCAGAAGGAGAAGATGCAGAATTTCTCTGAGAAATTGGGTTGGAGAATGCAGAAAGGGGATGAAGGGTTGGTGCAAGATTTCTGCAATGAGATTGGCGTTTCAAGAGGGGTCTTCAAGGTGTGGATGCACAACAATAAGAACACTTGCAGGAAGAGATCGTTGGAGCCTGATGAAAACACCAATGCCAATGGTTCTGATACTCTTAATAACAATCCTTACAGCACCAACGATGACACTCAAAACTGA 795 0.5459 MDLTNNANTTHTNPQTPQHPTTKRHRPTTVPPPSQPPSAVVCYKECLKNHAASIGGHALDGCGEFMPSSSSNPTEPRSLTCAACGCHRNFHHRDTQQYHSNPRPNFISFYHSPPPPHHGPGLCTSPSPSPLSSPSPPPLSHHFPGRRPVLGLFGPGNEHRHTSFHLSERPSGKKRFRTKFSQEQKEKMQNFSEKLGWRMQKGDEGLVQDFCNEIGVSRGVFKVWMHNNKNTCRKRSLEPDENTNANGSDTLNNNPYSTNDDTQN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01301 264 MobiDBLite consensus disorder prediction 241 264 - -
Phac2g01301 264 MobiDBLite consensus disorder prediction 233 264 - -
Phac2g01301 264 Gene3D - 160 234 - -
Phac2g01301 264 MobiDBLite consensus disorder prediction 95 176 - -
Phac2g01301 264 MobiDBLite consensus disorder prediction 108 143 - -
Phac2g01301 264 SUPERFAMILY Homeodomain-like 164 234 IPR009057 -
Phac2g01301 264 MobiDBLite consensus disorder prediction 1 36 - -
Phac2g01301 264 FunFam Zinc-finger homeodomain protein 2 160 234 - -
Phac2g01301 264 Pfam ZF-HD protein dimerisation region 41 95 IPR006456 -
Phac2g01301 264 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 43 94 IPR006456 -
Phac2g01301 264 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 43 94 IPR006456 -
Phac2g01301 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 231 - -
Phac2g01301 264 NCBIfam homeobox domain, ZF-HD class 173 230 IPR006455 -
Phac2g01301 264 MobiDBLite consensus disorder prediction 1 25 - -
Phac2g01301 264 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01301 Phac-Chr2 10080709 10082493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01301 41 229 ZF-HD Transcription Factor Family AT1G69600 50.000 1.54e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac2g01301 ZF-HD_dimer 1.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01301 - - gmx:100817446 327.405