Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01296 ATGTTGAATGTTGAGGTGATTGGGAACAATAAAAGGAAGAGGTGTGGGAGGGTTTTCAGGTTCAAGAACTTTGCTGAACCTGGATACCCTGTTATGTTTGGTGGGCCATTTCGTGAGAATGTGAATGCATTGCTTGAATATGCAAATTTGGAGAGTCATCTGAGCATGCCAATGTGGTCTTTTGAACTTGAAGTTCATCACCACCCACCTTTGCATATCTTCTTGTTTGTGATTGAAGAGCCAATAGAAGCAGTGCTCAATCGTCATTGCAAGCATTGTCAATACGTTGGTAATGGTCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGCCATTTGCTATGTGTCAATGGATTGGAAATGGGTTCTAATTTGCCTGGAAACCAGATCATGGACTTTTGGAACCGTTTGTGCAAGGCATTGCAAGCAAGGAAGGTGAGTTTAAATGATGTTTCAGAAAAGAGGGGAATGGAACTGAGACTTGTGAATGGAATAGCATATAGTGAATCATGGTTCAGTCGTTGGGGTTACAAATTTGGTCGAGGAAGCTTTGGTGTGACTCAATCCATGTACCTGAAGGCCATAGAAGCAATAAGAAGCATGCCATTGTACTTGATCACACACCACATCACCAACTCCAACCATGCCATTCCACTCATCTTCTCAAGGTATCAAACACTTTCAGATCAATCCCTTCTTACCCTTGGTGACCTTTTTTCTTTCATGTTAGACCTCAAATCACGTCTTCCACCAGATATTTCCATTGCTTCTTATACCACCACTGCCTTGCTTGAGACCAATTGTCGTTGGTCCCCTAAAAGGATTGAAATGGCAACAAGGGTCATTGTTGAGGCCTTGAAAAAGACTGAGTTTAGATGGGTTTCAAGGCAAGAAGTTAGAGATGCTGCTCGTGCATACATTGGAGACACTGGTTTGCTAGATTTTGTCTTGAAGTCATTGGGAAACCATGTTGTAGGAAACTACTTGGTTCGTAGAAGCTTGAACCCTGTCACCAAAGTCTTGGAATATTGCTTGGAGGACATTTCTAAACTTTACACTTGTAATCAGAGTTTGGTAATGAGTAACAAAGTGAAGGACAAATACAAGATCACACGAACTCAACTAATCAAAGACATGCTTTATCTATACAACTACATTCTCGTAGACCCTAAACCAATCATGGGATCAGAATTTCTCTCAGCTATACCATTAGCAGCTAGGATCATTCTTGACACCAAGTATTTTATAAAAGACTACTTTGGAGATTTTTCTTACCAACTTGATCCAGTTTCACAAGATAAACTCAACCTTTATTGTACAATTTTGATGAGGAATGATGGTAATGGTGATGAGTACCTGAACAAGGCCTTTATGCCACCCCACGAGTGCATCACACTCAAAACAACTGCTACTATCAATGACTTGAAGCTGGAGGTTGAAAGAAGCTTTAGAGAAATGTATTGGGGGTTAAGAAGTTTTGTGGTGGAATCAATTCAGAATTTGAGTGTGAATAATGGGACAGATATGGTTTTTGGACTGACCAAAGTGGGTGAAAAAGTTGTAGTTGAAGGTCGTCACACCAACATGATTGAGCAAATATGTGAACGTGATCCAAATAGTGGCATAGTGGATTGTAGTTGTGGAACCATAGAAGATGATGGTGAAAGGATGGTCTCATGTGATATTTGTGAAATTTTGCAACACACTAGATGTGTTCGAATTCCAAACGACCAAGACATTCCTCATATTTTTCTATGCAAAAAATGTGAACAAGAAATTGTTTTCTTTCCTTCTTTGCCATAA 1806 0.3987 MLNVEVIGNNKRKRCGRVFRFKNFAEPGYPVMFGGPFRENVNALLEYANLESHLSMPMWSFELEVHHHPPLHIFLFVIEEPIEAVLNRHCKHCQYVGNGHMMHGVFHSNGFGHLLCVNGLEMGSNLPGNQIMDFWNRLCKALQARKVSLNDVSEKRGMELRLVNGIAYSESWFSRWGYKFGRGSFGVTQSMYLKAIEAIRSMPLYLITHHITNSNHAIPLIFSRYQTLSDQSLLTLGDLFSFMLDLKSRLPPDISIASYTTTALLETNCRWSPKRIEMATRVIVEALKKTEFRWVSRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVLEYCLEDISKLYTCNQSLVMSNKVKDKYKITRTQLIKDMLYLYNYILVDPKPIMGSEFLSAIPLAARIILDTKYFIKDYFGDFSYQLDPVSQDKLNLYCTILMRNDGNGDEYLNKAFMPPHECITLKTTATINDLKLEVERSFREMYWGLRSFVVESIQNLSVNNGTDMVFGLTKVGEKVVVEGRHTNMIEQICERDPNSGIVDCSCGTIEDDGERMVSCDICEILQHTRCVRIPNDQDIPHIFLCKKCEQEIVFFPSLP* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01296 601 SUPERFAMILY FYVE/PHD zinc finger 538 594 IPR011011 -
Phac2g01296 601 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 99 594 - -
Phac2g01296 601 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 531 594 IPR013083 -
Phac2g01296 601 SMART PHD_3 545 591 IPR001965 -
Phac2g01296 601 Pfam PHD-finger 546 592 IPR019787 -
Phac2g01296 601 CDD PHD_MMD1_like 545 590 - -
Phac2g01296 601 ProSitePatterns Zinc finger PHD-type signature. 546 590 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01296 Phac-Chr2 10019422 10022415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01296 11 601 PHD Transcription Factor Family AT5G22260 46.235 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac2g01296 PHD 4.4e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01296 K26271 - gmx:100780210 1021.92