Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01279 ATGGCCAGCAGCAAGTGTTGCATGATCTCTTCACAACAAAACCAGAATGCCCCCACATGTTGCCCTTTTCCGTCTCCTCCTTCAATGGGAATGGTCTATGCAGACATGATGGGATCTCTCTCTCTTTCTACTGTTTCAAATGCTCTTTCATCTCAAGAGAGCTATGGTTATGGTCATAGTCATGATCATGGCCATGCTTCTGGGGTGGAACATGGGAGGAGCACAAGCTGGACTTTTCCTTTCATGAGGGAGTTCCTTTCCTCAAACTTTGAAGACTGTAGTGATGTTGGGGCTGGGGAGAGTAACAGCAATGACAAAACAACCAACAATGGCAAGTTTAGTGAAGAAAGTAACCCTAACGAGAACCCTCTCAGTGGCAAAGAGGTAGATAGTGGACACTCTAAACTGTGTGCAAGAGGGCATTGGAGGCCTGTAGAAGATTCCAAGCTCAAGGAGCTTGTGGCTCTTTATGGCCCTCAGAATTGGAACCTCATAGCTGAAAAGCTAGAAGGAAGATCAGGGAAGAGTTGTAGACTGAGGTGGTTCAACCAGTTAGATCCAAGAATCAATAGAAGAGCTTTCAGTGAAGAGGAGGAAGAGAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCTATGATTGCAAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCGAGGAAGTACAGGGAACAATCCAGTGCTTACAGGAGGAGGAGAATGAGCCATTCTGTATACAAAAGGGTGGAGCAAAATCCAACCTTTGTTTGCAGCAGGGATAATGCCTCAACTGCGGAACAGGACCCAACGCCTTCTTATTGTCTCCATCTCCTCCACAATGAAGTAGGAGTTACAAATAACGTGTCTAGTTTCCCATCCTTCCATGGAGTAGGTGCTGGGGAGATTGTCGAGTTCGGCTCAAACGGTTCTCCACAAAACATGACTGGTGGGAGCGAAACAATGTCAAACACCCCACAACTTGGCCTGTGTGCTCAACCTCAACAAGCACCATATGATTTCTTCTCCGGTGGTGGAAGCAAAGACATGATGGGAGAGGCTAATGGCCAGATCAGATGCTGGGAAAGGACCAATGAATCTCTTCATCATCATTGCCAACAATCTGGTTCATACCCTCATTATCCCCAACAATATTTGATGGCAATGCAACAGCTAGACAACAACTCATGCAACAATTTTTACAGTTTCTTGAATTCCTCATCGGCATCAACAACCACAGGCAATGAACCATCATCATCACCATGTGTTGCAGGAATCAGAGATAAAGTGGTGAATAGTGACCCCCCAGATGGTGTTCCACCCCCATTTTTTGACTTCCTTGGAGTAGGAGCCACATGA 1389 0.4586 MASSKCCMISSQQNQNAPTCCPFPSPPSMGMVYADMMGSLSLSTVSNALSSQESYGYGHSHDHGHASGVEHGRSTSWTFPFMREFLSSNFEDCSDVGAGESNSNDKTTNNGKFSEESNPNENPLSGKEVDSGHSKLCARGHWRPVEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRMSHSVYKRVEQNPTFVCSRDNASTAEQDPTPSYCLHLLHNEVGVTNNVSSFPSFHGVGAGEIVEFGSNGSPQNMTGGSETMSNTPQLGLCAQPQQAPYDFFSGGGSKDMMGEANGQIRCWERTNESLHHHCQQSGSYPHYPQQYLMAMQQLDNNSCNNFYSFLNSSSASTTTGNEPSSSPCVAGIRDKVVNSDPPDGVPPPFFDFLGVGAT* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01279 462 CDD SANT 193 233 IPR001005 -
Phac2g01279 462 SMART sant 190 238 IPR001005 -
Phac2g01279 462 SMART sant 138 187 IPR001005 -
Phac2g01279 462 ProSiteProfiles Myb-like domain profile. 186 236 IPR001005 -
Phac2g01279 462 MobiDBLite consensus disorder prediction 53 72 - -
Phac2g01279 462 ProSiteProfiles Myb-like domain profile. 139 185 IPR001005 -
Phac2g01279 462 Pfam Myb-like DNA-binding domain 191 234 IPR001005 -
Phac2g01279 462 Pfam Myb-like DNA-binding domain 139 185 IPR001005 -
Phac2g01279 462 Gene3D - 192 263 - -
Phac2g01279 462 SUPERFAMILY Homeodomain-like 139 232 IPR009057 -
Phac2g01279 462 FunFam MYB transcription factor 192 262 - -
Phac2g01279 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 240 IPR017930 -
Phac2g01279 462 MobiDBLite consensus disorder prediction 96 127 - -
Phac2g01279 462 MobiDBLite consensus disorder prediction 96 132 - -
Phac2g01279 462 CDD SANT 142 183 IPR001005 -
Phac2g01279 462 Gene3D - 139 190 - -
Phac2g01279 462 FunFam MYB transcription factor 139 190 - -
Phac2g01279 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 185 IPR017930 -
Phac2g01279 462 PANTHER MYB PROTEIN-RELATED 139 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01279 Phac-Chr2 9774458 9777009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01279 25 264 MYB Transcription Factor Family AT1G69560 54.733 1.31e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g01279 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01279 K09422 - gmx:100776292 692.96