Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01255 ATGATGTCGTATCAATCAATGGAGGAGAGAAAGTTTGTGTGCAAGTATTGCAGCAAGAGGTTCCCGTGTGGGAAGTCTCTTGGTGGCCACATCAGGACTCACATGATGAGTGAGAATTCAGCTTTAGGTAATGCAGAGAGGAACATTGCTACTAATGGTATGTTCAAGTTGAATGGAGGGGGAAAGAGGAAGAGGGATTTGGGGTCTGAAGAAAATGGTGGTGGTGCTAGTCGGGGGAACTATAACATCATTTATGGTCTTAGAGAGAACCCCAAGAAGACCACGAGGTTTGTGCATTCCAATTCCAGTTTGCAGCTTGACAAGTTCTGCAAAGAATGTGGGAAGGGATTTTTTTCATTGAAGGCTCTTTGTGGCCACATGGCTTGTCACTCTGAAAAGGACAAGGGAGCCAACAGGTTTGAGAGCAGTTCTGGCGGGTTTTCTGAGAAGCAGAAATTGGTTATGGATAGTCAGTCTGACACTGAAACTTCTACGCCAAGGAGGTCCAAGAGAATGAGGTTCAAGACCCTTAGCGGTAGCAACAACCAAACTCAATCTTCTGTTTCGGAGGTTGAGCAGGGTCAAGAAGAGGTGGCCAGGTGTTTGATGATGTTGTCCAAGGATTCTAGCTATAAGGGTCGTTTTGCTTTGTTCACAGAGTCTTCTGATAACAACTCGGTTGTTCTGGAGGCAAAGTCACCTTCCCCGGAAACCAAGGTTACTATGATGAATAGTAATGGTAAGAATTTTATATCTAGTGCTTATGTGGAGAAGAAGTTGGAGCAGCCCAAGGACTTGAAGTTTAAGTATGCTGAAGTTGGCTATGATTCTGATAATTCAGATTCTGGGTATTTTAGATATGGTCCTAAGGAGGTTGACTCGACTGATTCAAATAACGGGAATTTCAAGAATGAGGCTATGTCTTCGAAAGCGGGGTACTTAACTGGGTTTGAGGATTATGATGTTGAGTCGAGGAAAGTGCTAAGCAGGGGAAGAAGCAGGAGCATTGAATTTAAGAAATTTGTTTTGGAGGATTGGGAGAATGATAGACAAGATGGTGGGGCTGCAAGGAAATTTGATTCAAAGAAATTTAAGAAGTCCAACTATGATTCTCTTGGCCAAAATTTAGGTGGGGTTTCTAGCAGGAAGATTGGGAATGGTTTTGCAAATGATAAGGTGAACAAGTACGAGTGCTTAACCAGTGATAGAAACAATGGTTATGATGATTCTGCTTATGAGAGTGATGAAAACAGCACAGACACTGATTCTTATCCAGCTCCAAAGGCGTACCGCAACCGGAACCTCAGTGGCCAAAAGGGGAAGAAGAAATTGAAGTCAAAGAAAAGCAAGGCACATGAGTGCCCAATCTGCAACAAAATTTTCAGGTCAGGCCAAGCCTTGGGGGGTCATAAGAGATCCCATTTTATTGGAGGTTCTGAAGAGAACACCCTTGTGATAAGGCCAGGTGCTCCTGCTGTTCCTTGCCTCATTGATCTCAATCTACCAGCACCAGTTGATGAATAG 1524 0.437 MMSYQSMEERKFVCKYCSKRFPCGKSLGGHIRTHMMSENSALGNAERNIATNGMFKLNGGGKRKRDLGSEENGGGASRGNYNIIYGLRENPKKTTRFVHSNSSLQLDKFCKECGKGFFSLKALCGHMACHSEKDKGANRFESSSGGFSEKQKLVMDSQSDTETSTPRRSKRMRFKTLSGSNNQTQSSVSEVEQGQEEVARCLMMLSKDSSYKGRFALFTESSDNNSVVLEAKSPSPETKVTMMNSNGKNFISSAYVEKKLEQPKDLKFKYAEVGYDSDNSDSGYFRYGPKEVDSTDSNNGNFKNEAMSSKAGYLTGFEDYDVESRKVLSRGRSRSIEFKKFVLEDWENDRQDGGAARKFDSKKFKKSNYDSLGQNLGGVSSRKIGNGFANDKVNKYECLTSDRNNGYDDSAYESDENSTDTDSYPAPKAYRNRNLSGQKGKKKLKSKKSKAHECPICNKIFRSGQALGGHKRSHFIGGSEENTLVIRPGAPAVPCLIDLNLPAPVDE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01255 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 507 - -
Phac2g01255 507 MobiDBLite consensus disorder prediction 175 192 - -
Phac2g01255 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Phac2g01255 507 MobiDBLite consensus disorder prediction 435 449 - -
Phac2g01255 507 Gene3D Classic Zinc Finger 2 135 - -
Phac2g01255 507 MobiDBLite consensus disorder prediction 135 192 - -
Phac2g01255 507 MobiDBLite consensus disorder prediction 407 450 - -
Phac2g01255 507 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Phac2g01255 507 MobiDBLite consensus disorder prediction 141 162 - -
Phac2g01255 507 SUPERFAMILY beta-beta-alpha zinc fingers 8 36 IPR036236 -
Phac2g01255 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 39 IPR013087 -
Phac2g01255 507 ProSitePatterns Zinc finger C2H2 type domain signature. 454 474 IPR013087 -
Phac2g01255 507 SUPERFAMILY beta-beta-alpha zinc fingers 109 474 IPR036236 -
Phac2g01255 507 Pfam C2H2-type zinc finger 451 474 - -
Phac2g01255 507 Pfam C2H2-type zinc finger 110 132 - -
Phac2g01255 507 Pfam C2H2-type zinc finger 12 35 - -
Phac2g01255 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 452 474 IPR013087 -
Phac2g01255 507 ProSitePatterns Zinc finger C2H2 type domain signature. 14 34 IPR013087 -
Phac2g01255 507 SMART c2h2final6 108 130 IPR013087 -
Phac2g01255 507 SMART c2h2final6 452 474 IPR013087 -
Phac2g01255 507 SMART c2h2final6 12 34 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01255 Phac-Chr2 9282456 9284916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01255 5 507 C2H2 Transcription Factor Family AT1G26610 40.816 3.36e-94 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g01255 zf-C2H2_6 1e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01255 - - gmx:100805520 702.59