Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01195 ATGCTATTCTGCATTTTGCTTGTTTCGATGTCTGCTATTGCATTAGCTTATTATAGGCTTAGATGCTCTACTTTACTGGCTAGTTGTGTAAAAGTATGGAAGGTTGTTTTTGTCTTTATCTGTGAGATCCTCTATGCTGGAATAATTGAGTACATGAGCTCAAGGATATGTTATAATTGTTTAAACTTGGTGGATATTTGTGTTCTTGACTGTTCTTACGCTCCTGAAGGTGACAAGTATAAGGTAGCAAAACGATGGGGCCACATTCATATTGTGATAAGTAAATGGTTTGATCAATCAATTGCTCGAAGAGCATGTCTGAATGAGGAGTTCTTCCCTGTTCAGCATGGATCTGTATCTTCACATAAAGTAACCAGGGACTTAACAATGCAACACAGCCAAGAAAAGGATATTGGGAAATTGCAATCTGCGGCATGCTCAGGTGCTACAGATTCAAATGTGCAAGTTTCTTGTGCTGAGTTTATGGAAAGTGATCAAGAAGCTATGCCATCAGAATATATGTCCTCGGTTTCACAAACTCGTAGATTTGCTAAGGAGGCAGATGTTGAACCTCCATTGCAGGCCAGTGGTAACTTTGACGGTGTTGTTGCTGATGATTCTGAATCTGATGATAAAGATTTGTACTTATCAGAGTGCAGAATATTTCTAGTTGGTTTTGAAGCTCTAGAAATGCGGAAACTAATTAATATTGTGCGTAAAGGTGGAGGCTCCCGGTATATGTCTTTTAATGACAAATTGACACACATAGTAGTTGGGAATCCTACTGAAATGGAAAAGAAGGATGTGAGGAGTCTTGCTGCTTTAGGTGTAATTTATGTTGTTAAAACCACATGGCTTGAAGATTGCGACCATAAAAAGATAGAAGTCCCTGTTCTTAGGAGACACATTGCATATGATCTACTTCATCCAAAAGCAAGCTTGGTAAAAGGAACCGTAACAGGAAGCACATCTATGGATCACAGTAAAAGCTCCAGTTGTCATCAAAGCTCACATCAGGTGGACTTCAAAATTGTGCAGCCAGAATCTTTGGAGAAAAGAAAAGAAGAGATACAAGATATGGATATAAATGGTCTCTCATTCCGTAAAGCAAATTGTAGAACTATGTTGCAAAATGAACTTCCTGATAGTAAATTGAGCACACAAAGAATGAGCCAGCCTGACTTCAGTGTTCCATACGAAAAATCTGCAAATGTTTTCAGAGGGAAGCTGTTTTGTTTCTCAAATTTGTTTCCTGAAGAAAAGAGAGGTGAGATTGTTCAATGGATAAGTCAAGGTGGAGGAGTGGTAATAAGTGGGAAAACAAAACAGATTGTCCACTACACAGTTGAGTGTCATGGTGTAACACCCATGTTGACTGGTGATTCCACGAGTTTGTACATTTCCAGTCATTGGATACGATCTTGTTTGGAGGCTGGATCCTTGCTGGATGTTGACACTCACATTCTTTATTCTCCACTTCCCTGCCACGTTCCCTTGCCTGGATTTGAAAGATTCCGGTTTTGTGTTTCACAGTATGAGGAGAAAGACAGGAATCTGCTAAGAAACTTGTGTTTTGTTCTAGGAGCTAAATTTGGGGAGAAGTTGACTAAGAAGGTTACGCATTTGTTGTGTAAATTCACCAATGGACCCAAGTATGATGGTGCTCTTAAATGGGGGATTCAATCAGTTACATCTGAATGGATATTTGAATGCATCAAACAGAATGGAGTTGTTGCCACTGATCGATTTTTACCAAAAGAAGTAACAGCTCAAGATCGAGAGGCAGGAATTTGCACTGGGAGTCAATTTCCTACCCAGGCTGCTCAAATGATAAGTGACATGCCCTCGCAGTTGTCAAGTCAATCACAAATTTTGAGAGGCATCACAAATAAAAATGTGGGTCGTGGAGTTGATAATCATGAGGCCAATTTCAAGAAACCAAGTGTTTATAGCAAAAAGGCAAGACTTGTGGAAGAACCTTGCATGTCTAATACAATGACTTCGGCATCAAATTCAGGTATTCATGCCTATGAAAATATTTTTTCTGAAGACAATATGATAATTGATGCTGGGGAGGTGTGCCTTACTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACTAGTAAGGTACAACAGCTGCTTTTTTTTGTTATGTTGATATTTCATTAA 2181 0.3929 MLFCILLVSMSAIALAYYRLRCSTLLASCVKVWKVVFVFICEILYAGIIEYMSSRICYNCLNLVDICVLDCSYAPEGDKYKVAKRWGHIHIVISKWFDQSIARRACLNEEFFPVQHGSVSSHKVTRDLTMQHSQEKDIGKLQSAACSGATDSNVQVSCAEFMESDQEAMPSEYMSSVSQTRRFAKEADVEPPLQASGNFDGVVADDSESDDKDLYLSECRIFLVGFEALEMRKLINIVRKGGGSRYMSFNDKLTHIVVGNPTEMEKKDVRSLAALGVIYVVKTTWLEDCDHKKIEVPVLRRHIAYDLLHPKASLVKGTVTGSTSMDHSKSSSCHQSSHQVDFKIVQPESLEKRKEEIQDMDINGLSFRKANCRTMLQNELPDSKLSTQRMSQPDFSVPYEKSANVFRGKLFCFSNLFPEEKRGEIVQWISQGGGVVISGKTKQIVHYTVECHGVTPMLTGDSTSLYISSHWIRSCLEAGSLLDVDTHILYSPLPCHVPLPGFERFRFCVSQYEEKDRNLLRNLCFVLGAKFGEKLTKKVTHLLCKFTNGPKYDGALKWGIQSVTSEWIFECIKQNGVVATDRFLPKEVTAQDREAGICTGSQFPTQAAQMISDMPSQLSSQSQILRGITNKNVGRGVDNHEANFKKPSVYSKKARLVEEPCMSNTMTSASNSGIHAYENIFSEDNMIIDAGEVCLTVPDVAAAIEDLLEQTSKVQQLLFFVMLIFH* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01195 726 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 74 623 - -
Phac2g01195 726 SMART BRCT_7 403 479 IPR001357 -
Phac2g01195 726 SMART BRCT_7 499 575 IPR001357 -
Phac2g01195 726 SMART BRCT_7 213 293 IPR001357 -
Phac2g01195 726 FunFam Transcription coactivator 194 303 - -
Phac2g01195 726 SUPERFAMILY BRCT domain 468 586 IPR036420 -
Phac2g01195 726 Gene3D BRCT domain 496 590 IPR036420 -
Phac2g01195 726 Gene3D BRCT domain 202 299 IPR036420 -
Phac2g01195 726 SUPERFAMILY BRCT domain 404 491 IPR036420 -
Phac2g01195 726 ProSiteProfiles BRCT domain profile. 401 489 IPR001357 -
Phac2g01195 726 ProSiteProfiles BRCT domain profile. 211 289 IPR001357 -
Phac2g01195 726 SUPERFAMILY BRCT domain 208 295 IPR036420 -
Phac2g01195 726 Pfam BRCA1 C Terminus (BRCT) domain 213 289 IPR001357 -
Phac2g01195 726 Pfam BRCT domain, a BRCA1 C-terminus domain 403 486 IPR001357 -
Phac2g01195 726 ProSiteProfiles BRCT domain profile. 502 585 IPR001357 -
Phac2g01195 726 FunFam Transcription coactivator 399 495 - -
Phac2g01195 726 Gene3D BRCT domain 398 495 IPR036420 -
Phac2g01195 726 SUPERFAMILY BRCT domain 47 116 IPR036420 -
Phac2g01195 726 CDD BRCT_TopBP1_rpt2_like 500 575 - -
Phac2g01195 726 Pfam twin BRCT domain 506 567 IPR001357 -
Phac2g01195 726 Gene3D BRCT domain 44 117 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01195 Phac-Chr2 8586442 8605787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01195 63 715 Core DNA Replication Machinery Family AT1G77320 42.566 4.06e-157 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01195 K10728 - gmx:100804966 1022.69