Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g01182 | ATGAAGAGGTCTAGAGATGAAGTTTTCACGAGTTGTTCTCAACTCAAACGGCCTGTGGTGTCTGCTCGAGGAGAAGCGTCTGGGCAACAGCAGATGGCAAATGGAGGTGCTCAGAAATTGACAACTAATGATGCCCTAGCATATCTTAAAGCAGTAAAGGATATATTTCAAGATAAGAGGGACAAGTATGATGACTTTTTGGAGGTTATGAAAGATTTCAAGGCTCAAAGAATTGATACCGCGGGTGTCATTGCAAGAGTGAAGGAACTGTTTAAAGGCCATAGAGATCTTATATTAGGATTTAACACCTTCTTGCCTAAGGGGTATGAAATCACACTTCCATCAGAGGATGAACAACCTGCTCCAAAGAAACCTGTTGAATTTGAAGAAGCTATAAATTTTGTGAACAAGATAAAGACTCGTTTTCAAGGCGATGATCATGTGTACAAATCATTTCTTGACATATTGAACATGTACAGAAAGGAAAACAAGTCTATTACCGAGGTCTACCAGGAGGTTGCTGCTATTTTCCAGGACCACCCTGATCTTCTTGACGAGTTTACTCATTTTCTTCCAGACGCTTCTGCAGCTGCCTCTACTCATTATGCTTCTGCTCGTAATTCTATTCTTCGTGATAGGAGCTCAATTCCAACAGTACGCCCAATGCATGTTGAAAAGCGAGAAAGGACCATGGTTTCACATGGGGATCATGACCCCAGTGGTGATCGTCCTGACCTAGATCACGACAGAGGTTTGTTAAGGATAGAAAAGGAGAGGAGACGTGTGGAGAAGGAAAAGGAACGCAGAGAAGATAGAGACAAGAGAGAACGGGAAAAGGATGATAGAGATTATGAGCATGATAGGGAGCGATTTCCTCACAAACGGAATCGTAAGGTTGAAGACTCTGGAGCTGAACCATTGCTTGATGCAGATGAAAATTTTGTTATGCGTCCTATGTCATCCACTTGTGATGATAAAAATTCTCTGAAAAGTATGTACAGTCAAGAGTTAGCTTTCTGCGAAAAAGTCAAAGAAAAATTACGAAATCCTGATGACTACCAGGAATTTTTGAAGTGCTTACATATTTACAGCAGGGAAATAATTACCCGACAAGAGTTGCAGTCATTGGTGGGCGATTTACTGGGAAAGTATCCAGATCTTATGGAGGGCTTTAATGAATTTTTGCTACAATCTGAAAAAAATGATGGTGGATTCCTTGCTGGTGTTATGAATAAAAAGTCCTTATGGAATGATGGACATGGACTGAAACAAATGAAGGGTGAAGACAGGGAAAGAGAACGGGATCGAGATAGAGACCGATATAGGGATGACGGGATGAAAGAAAGGGACCGTGAGTTCCGTGAACGGGATAAATCTACTGTGATTGCCAACAAGGATGTTTTAGGTTCTAAGATGTCTCTATATCCCAGCAAGGATAAGTATTTATCAAAACCTATAAATGAGCTGGACCTTTCTAACTGCGACCAGTGTACTCCTAGTTACCGGCTCTTACCAAAAAATTACCCAATACCTATAGCTAGCCAGAAAACAGAACTTGGTGCTGAAGTGTTGAATGATCACTGGGTGTCTGTCACTTCAGGAAGTGAGGATTACTCCTTCAAACATATGCGCAAAAATCAGTATGAAGAGAGCTTGTTTAGATGCGAAGATGACAGGTTTGAACTTGACATGTTGTTAGAGTCTGTGAATGTAACAACCAAACGGGTAGAAGAGCTGTTAGACAAGATCAATAATAATACAATTAAAGGAGATATCCCAATTCGTATTGAGGAGCACTTAACAGCTATAAATCTTAGGTGTATCGAAAGATTATATGGTGATCATGGGCTTGATGTGATGGAAGTGTTAAGGAAAAATGCACCTCTAGCTTTGCCAGTGATATTAACACGCTTGAAGCAGAAACAGGAAGAATGGGCAAGGTGCCGTGCTGATTTTAGTAAAGTTTGGGCTGAAATATATGCGAAGAACTATCACAAATCTCTTGATCATCGTAGCTTCTACTTTAAGCAGCAGGATACGAAAAGCCTGAGCACCAAAGCCTTGCTGGCAGAAATCAAAGAAATCAGTGAAAAGAAACGCAAAGAAGATGATGTTCTTCTTGCTATTGCTGCTGGAAACAGATGGCCAATTCTACCAAACTTGGAGTTTAAGTATTCTGATCTAGATATTCATGAAGATTTGTATCAACTCATAAAATATTCCTGTGGTGAAATTTGCACAACCGAACACGTGGATAAAGTTATGAAGGTTTGGACAACATTTTTAGAGCCCATGCTTTGTGTTCCTTCTCGGCCCCAGGGTGCAGAGGATACAGAAGATGTTATCAAGACTAAGAATAGTAATGTCAAGAATGGCACTGCAAGTGTTGCTGAAAGTGATGGTAGCCCTATTGTGGGTGCTACCATCATGAATCCAAAGCATATAAATGTTTCCAGAAATGGGGATGGTTGTATGCCAGAGCCAGTAGACCAATCAACTTCTAGTAAAGCATGGCAATCAAATGGTGATAGTGGTGTTAGAGAGGATAGGTATCTTGATGACCGTGCAATGCGTAAAACTGAAACTTTGGGAAGTAATTCACAGCATGGTAAAATGAATAATATTGCTTTCCCACCTAATGAACTATCAGGATTTAATAATAAGCAAGACCAGTCCAGTGAAAGGTTAGTGAATGCAAATGTCTCACCCGCATCTGGAATGGAGCAAAGCAATGGGAGAACAAACATAGATAATTTGTCAGGACTAACTGCCACTCCAACTAGACCTGTTAATGCTTCTGCTGGGGGAGGACCTGATATACCACCTTTAGAGGGTGGTGATTCTGCAAGACCGGGTACATCCTCAAATGGGGCCATCACTGGAGGAACCAAAGTCCACCGATATCAAGAGGAATCAGTTCGGCCCTTCAAAAGTGAAAGAGAAGAGGGTGAGTTATCTCCTAATGGAGACATTGAAGAAGATAACTTTGAAGTTTATGGAGGTAATGGTTTGGATGCAGTGCATAAAGAAAAGGATGGTGGTATGAGTCGGCAATATCAAGATCGACATGGGGATGATGTTTGTGGTGAAACCAGAGGAGAAAACGATGTTGATGCTGATGATGAAGGTGAAGAAAGTCCTCACAGGTCATCAGAGGACAGTGAAAATGCATCTGAAAATGTCGATGTTTCTGGAAGCGAGTCTGCTGATGGTGAGGAGTGTTCTCGAGAAGAGCATGAGGATGGGGAACATGATCACAAGGCTGAGAGTGAAGGTGAAGCTGAAGGAATAGCTGATGCTCATGACGTTGAAGGAGATGGAATGTCATTGCCATATTCTGAACGCTTTCTCCTAACTGTGAATCCACTAGCAAAGTATGTTCCTCCAATGTTACATGAGAAGGACAGGAATTCAAGAGTTTTCTATGGAAATGATTCCTTTTATGTGCTTTTTAGACTTCATCAGACATTGTATGAGAGGATACAATCAGCGAAGATTAACTCATCATCTGCTGATAGGAAATGGAAGGCTTCGAGTGATACAAGCTCTACTGATCAATATGACAGATTCATGAATGCCCTTTACAGTTTGCTGGATGGTTCTTCTGATAACACAAAATTTGAGGATGATTGTCGAGCTATAGTTGGAATTCAGTCATATGTCTTATTCACATTAGACAAGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCTGCTGATGAGATGGATAGTAAGCTTCTACAACTGTATGCATATGAGAAATCAAGAAAACCTGAAAAATTTGTCGACATAGTTTATCATGAAAATGCCCGAGTTCTTCTCCATGATGAGAATATATATCGGGTTGAATTTTCACCTGGAGCAACGAAACTGTCTGTTCAACTGATGGACTCTGGACATGATAAACCTGAAGTGACTGCTGTTTCAATGGACCCAAATTTTTCAACCTATCTACTCAACGACTTCCTGTCTGTCGTCCCTGACAAAAAAGAGAAGTCAGGGATTTTCTTGAAGAGGAACAAACGTAGATATGCTGGTAGTGATGAATTTTCAAGCCAGGCTATGGAAGGACTACAAATTATTAATGGTCTGGAGTGCAAGATAGCTTGCAGTTCATCGAAGGTCTCTTACGTTTTAGATACTGAAGACTTTTTGTATCGGGTGAGAAGGAAACGAAGAATCTTGCATCCAAAGAGTTCAGGCACCCATGAACAGGCACAGTCCTCAAACATTCGTTCAAGAAGAGTACAACGATTCCGCAACTTGTTTTCCATTACATGA | 4287 | 0.4084 | MKRSRDEVFTSCSQLKRPVVSARGEASGQQQMANGGAQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDEQPAPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAIFQDHPDLLDEFTHFLPDASAAASTHYASARNSILRDRSSIPTVRPMHVEKRERTMVSHGDHDPSGDRPDLDHDRGLLRIEKERRRVEKEKERREDRDKREREKDDRDYEHDRERFPHKRNRKVEDSGAEPLLDADENFVMRPMSSTCDDKNSLKSMYSQELAFCEKVKEKLRNPDDYQEFLKCLHIYSREIITRQELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDGGFLAGVMNKKSLWNDGHGLKQMKGEDRERERDRDRDRYRDDGMKERDREFRERDKSTVIANKDVLGSKMSLYPSKDKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPIASQKTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKGDIPIRIEEHLTAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQEEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRWPILPNLEFKYSDLDIHEDLYQLIKYSCGEICTTEHVDKVMKVWTTFLEPMLCVPSRPQGAEDTEDVIKTKNSNVKNGTASVAESDGSPIVGATIMNPKHINVSRNGDGCMPEPVDQSTSSKAWQSNGDSGVREDRYLDDRAMRKTETLGSNSQHGKMNNIAFPPNELSGFNNKQDQSSERLVNANVSPASGMEQSNGRTNIDNLSGLTATPTRPVNASAGGGPDIPPLEGGDSARPGTSSNGAITGGTKVHRYQEESVRPFKSEREEGELSPNGDIEEDNFEVYGGNGLDAVHKEKDGGMSRQYQDRHGDDVCGETRGENDVDADDEGEESPHRSSEDSENASENVDVSGSESADGEECSREEHEDGEHDHKAESEGEAEGIADAHDVEGDGMSLPYSERFLLTVNPLAKYVPPMLHEKDRNSRVFYGNDSFYVLFRLHQTLYERIQSAKINSSSADRKWKASSDTSSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIVGIQSYVLFTLDKLIYKLVKQLQAVAADEMDSKLLQLYAYEKSRKPEKFVDIVYHENARVLLHDENIYRVEFSPGATKLSVQLMDSGHDKPEVTAVSMDPNFSTYLLNDFLSVVPDKKEKSGIFLKRNKRRYAGSDEFSSQAMEGLQIINGLECKIACSSSKVSYVLDTEDFLYRVRRKRRILHPKSSGTHEQAQSSNIRSRRVQRFRNLFSIT* | 1429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g01182 | 1428 | FunFam | Paired amphipathic helix protein Sin3 | 44 | 106 | - | - | |
Phac2g01182 | 1428 | SUPERFAMILY | PAH2 domain | 38 | 107 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 1004 | 1034 | - | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 422 | 454 | - | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 967 | 985 | - | - | |
Phac2g01182 | 1428 | FunFam | Paired amphipathic helix protein SIN3 | 326 | 400 | - | - | |
Phac2g01182 | 1428 | Gene3D | Paired amphipathic helix | 44 | 106 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 1042 | 1056 | - | - | |
Phac2g01182 | 1428 | SMART | hdac_interact2seq4b | 493 | 593 | IPR013194 | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 420 | 454 | - | - | |
Phac2g01182 | 1428 | SUPERFAMILY | PAH2 domain | 327 | 395 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | ProSiteProfiles | PAH domain profile. | 329 | 398 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 1069 | 1094 | - | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 827 | 842 | - | - | |
Phac2g01182 | 1428 | Pfam | Paired amphipathic helix repeat | 351 | 395 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | Pfam | Paired amphipathic helix repeat | 61 | 105 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | Pfam | Paired amphipathic helix repeat | 147 | 191 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 213 | 310 | - | - | |
Phac2g01182 | 1428 | Pfam | Sin3 family co-repressor | 496 | 587 | IPR013194 | - | |
Phac2g01182 | 1428 | Pfam | C-terminal domain of Sin3a protein | 1141 | 1387 | IPR031693 | - | |
Phac2g01182 | 1428 | Coils | Coil | 252 | 275 | - | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 826 | 847 | - | - | |
Phac2g01182 | 1428 | Gene3D | Paired amphipathic helix | 123 | 195 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 861 | 1094 | - | - | |
Phac2g01182 | 1428 | Gene3D | Paired amphipathic helix | 327 | 399 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | PANTHER | SIN3B-RELATED | 38 | 1284 | IPR039774 | GO:0003714 | |
Phac2g01182 | 1428 | SUPERFAMILY | PAH2 domain | 122 | 193 | IPR036600 | GO:0006355 | |
Phac2g01182 | 1428 | ProSiteProfiles | PAH domain profile. | 38 | 108 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | ProSiteProfiles | PAH domain profile. | 124 | 194 | IPR003822 | GO:0006355 | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 218 | 305 | - | - | |
Phac2g01182 | 1428 | FunFam | Paired amphipathic helix SIN3-like protein | 123 | 194 | - | - | |
Phac2g01182 | 1428 | MobiDBLite | consensus disorder prediction | 861 | 930 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g01182 | Phac-Chr2 | 8497412 | 8509899 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g01182 | 33 | 143 | WRKY Transcription Factor Family | AT4G12020 | 50.450 | 1.07e-23 | 107 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Phac2g01182 | Sin3a_C | 5e-60 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g01182 | K11644 | - | gmx:100811928 | 2524.97 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac2g01182 | 2 | 8497412 | 8509899 | Phac2g01182 | 2 | 8497412 | 8509899 | ECH |