Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01152 ATGCATGCTGGAACTTCAAGAGTTTACTATAAAAGGAAGAGAAACCTAACAACTAACCACTGCATTTCCAACCTCAAAATATTTTTTTACCAAAGAGAGATGGAAAAGGATATCTGTGATCTTTCTCAAACATGGGATGGTGATAATGGCAACTCTACTGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTAAACCCTTCTAAAGAGGGTTGTCTCAAAGAGTCTGGTGAAGGAGATGAAAGCGTAAACTCCTCTAACTCAGTCTCATCAGGAGGAGACAAAACTGTGCAAGAAAAGACCTCAGCCAAAGACCCAGATGAGAAGAAGTTCGAGTGCCAATACTGTTTCAAAGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCTATAAACCGTTACCTCCAACACCCTTTTCAAACCAACCATGGCTTTGCTTACCAAGCCTCTGATAGTCCTTGGTTCTATGACCCCTCTACCTACAATTCTGAGTTCACCCTTTGTGAAGAACCTCAGATTAGCTTCAATTCAAATGTTTTAGATACCAATTTTTCTTGTGACCAGAAATCTAGTTGGTATTCTCTTGCATCACACCCACCTTCACAGCAAGATACCTGCATGTTTACTTTCTCGAATGCAAATAATAACACTCCTTTCATCCATAAACCTTGCCACTTCCCTTCTTCAAACCAGAGTCATAGTAAAGCCCTAGATCTTCAACTAGGCCTCAACTTGGAGTCAAATACAAGAAGTTCTCTAAGGAGGATGTAA 819 0.4042 MHAGTSRVYYKRKRNLTTNHCISNLKIFFYQREMEKDICDLSQTWDGDNGNSTEKRLRLFGFELNPSKEGCLKESGEGDESVNSSNSVSSGGDKTVQEKTSAKDPDEKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFQTNHGFAYQASDSPWFYDPSTYNSEFTLCEEPQISFNSNVLDTNFSCDQKSSWYSLASHPPSQQDTCMFTFSNANNNTPFIHKPCHFPSSNQSHSKALDLQLGLNLESNTRSSLRRM* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01152 272 PANTHER ZINC FINGER PROTEIN 5 51 262 IPR044299 GO:0010090
Phac2g01152 272 MobiDBLite consensus disorder prediction 78 96 - -
Phac2g01152 272 SUPERFAMILY beta-beta-alpha zinc fingers 106 137 IPR036236 -
Phac2g01152 272 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Phac2g01152 272 MobiDBLite consensus disorder prediction 70 102 - -
Phac2g01152 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Phac2g01152 272 Gene3D Classic Zinc Finger 84 161 - -
Phac2g01152 272 FunFam zinc finger protein 5 84 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01152 Phac-Chr2 8087749 8089203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01152 43 146 C2H2 Transcription Factor Family AT5G06650 41.121 2.82e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g01152 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01152 - - gmx:100527006 408.297